BLASTX 7.6.2
Query= RU04308 /QuerySize=1023
(1022 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157360509|emb|CAO70072.1| unnamed protein product [Vitis vini... 160 2e-037
gi|15217814|ref|NP_174126.1| zinc finger (B-box type) family pro... 110 2e-022
gi|62321306|dbj|BAD94541.1| hypothetical protein [Arabidopsis th... 110 2e-022
gi|186911832|gb|ACC95131.1| COL3 [Beta vulgaris subsp. vulgaris] 99 4e-019
gi|38175538|dbj|BAD01231.1| zinc-finger protein C60910-like [Ory... 99 7e-019
>gi|157360509|emb|CAO70072.1| unnamed protein product [Vitis vinifera]
Length = 431
Score = 160 bits (403), Expect = 2e-037
Identities = 86/119 (72%), Positives = 89/119 (74%), Gaps = 5/119 (4%)
Frame = -2
Query: 505 KFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRSDSLRTTGT 326
K NSNNP SQG ATSESNN+ I RPSSGSAF + K I T I S T
Sbjct: 318 KMQNNSNNPTASQGAATSESNNLPIARPSSGSAFAKPKSFINRT-----IYSYERTAATT 372
Query: 325 KADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPDG 149
K D+E LAQNRGNAMLRYKEKKK RRYDKHIRYESRKARADTRKRVKGRFVKATEAPDG
Sbjct: 373 KVDLEQLAQNRGNAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKATEAPDG 431
>gi|15217814|ref|NP_174126.1| zinc finger (B-box type) family protein
[Arabidopsis thaliana]
Length = 433
Score = 110 bits (274), Expect = 2e-022
Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 12/127 (9%)
Frame = -2
Query: 520 GQDDIKFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFL--IRSD 347
G +IK + + + P SESNN I FG +KG+ ++++ F I
Sbjct: 312 GVKEIKKDDYKRSTSGQVQPTKSESNNRPI-------TFGSEKGSNSSSDLHFTEHIAGT 364
Query: 346 SLRTT---GTKADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRF 176
S +TT TKAD+E LAQNRG+AM RYKEK+K RRYDK IRYESRKARADTR RV+GRF
Sbjct: 365 SCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRF 424
Query: 175 VKATEAP 155
VKA+EAP
Sbjct: 425 VKASEAP 431
>gi|62321306|dbj|BAD94541.1| hypothetical protein [Arabidopsis thaliana]
Length = 132
Score = 110 bits (274), Expect = 2e-022
Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 12/127 (9%)
Frame = -2
Query: 520 GQDDIKFNINSNNPAVSQGPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFL--IRSD 347
G +IK + + + P SESNN I FG +KG+ ++++ F I
Sbjct: 11 GVKEIKKDDYKRSTSGQVQPTKSESNNRPI-------TFGSEKGSNSSSDLHFTEHIAGT 63
Query: 346 SLRTT---GTKADMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRF 176
S +TT TKAD+E LAQNRG+AM RYKEK+K RRYDK IRYESRKARADTR RV+GRF
Sbjct: 64 SCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRF 123
Query: 175 VKATEAP 155
VKA+EAP
Sbjct: 124 VKASEAP 130
>gi|186911832|gb|ACC95131.1| COL3 [Beta vulgaris subsp. vulgaris]
Length = 330
Score = 99 bits (246), Expect = 4e-019
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = -2
Query: 319 DMELLAQNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
DME LA+NRG AMLRYKEKKK RRYDKHIRYESRKARAD R+RVKGRFVKA++ PD
Sbjct: 270 DMEQLAENRGKAMLRYKEKKKTRRYDKHIRYESRKARADIRQRVKGRFVKASDTPD 325
>gi|38175538|dbj|BAD01231.1| zinc-finger protein C60910-like [Oryza sativa
Japonica Group]
Length = 488
Score = 99 bits (244), Expect = 7e-019
Identities = 58/110 (52%), Positives = 69/110 (62%), Gaps = 7/110 (6%)
Frame = -2
Query: 466 GPATSESNNISIGRPSSGSAFGEDKGNIATTEGPFLIRS-----DSLRTTGTKADMELLA 302
GP TS S+ + GS+ D+G+ E F ++ R K D E LA
Sbjct: 375 GPTTSTSHVPAASGALGGSS--NDRGSALPKEISFCDQTVVPTGADQRPCTIKIDSETLA 432
Query: 301 QNRGNAMLRYKEKKKNRRYDKHIRYESRKARADTRKRVKGRFVKATEAPD 152
QNR +AM RY+EKKKNRRY+KHIRYESRK RADTRKRVKGRFVK+ APD
Sbjct: 433 QNRDSAMQRYREKKKNRRYEKHIRYESRKLRADTRKRVKGRFVKSNGAPD 482
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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