BLASTX 7.6.2
Query= RU04450 /QuerySize=676
(675 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15230731|ref|NP_187301.1| MYB108 (MYB DOMAIN PROTEIN 108); DN... 268 3e-070
gi|41619230|gb|AAS10054.1| MYB transcription factor [Arabidopsis... 266 1e-069
gi|21215202|gb|AAM43912.1|AF510112_1 MYB transcription factor [C... 265 3e-069
gi|1002798|gb|AAB58313.1| Cpm5 [Craterostigma plantagineum] 262 2e-068
gi|147773545|emb|CAN63179.1| hypothetical protein [Vitis vinifera] 252 2e-065
>gi|15230731|ref|NP_187301.1| MYB108 (MYB DOMAIN PROTEIN 108); DNA binding /
transcription factor [Arabidopsis thaliana]
Length = 323
Score = 268 bits (684), Expect = 3e-070
Identities = 145/229 (63%), Positives = 168/229 (73%), Gaps = 14/229 (6%)
Frame = +2
Query: 2 GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 181
GEGRWNSL+RCAGL+RTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI
Sbjct: 40 GEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 99
Query: 182 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAST 361
AQ+LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQ+A+++S
Sbjct: 100 AQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSA 159
Query: 362 APTGASSSITTAAANTYH-FNNNNNSFQAAAGAGHVALQQATLIGNNNDLAGSYTTPENS 538
A +++ TT +A T +NN F + QQ ++ NN+ Y TPENS
Sbjct: 160 AAATTTTTTTTGSAGTSSCITTSNNQFMNYDYNNNNMGQQFGVMSNND-----YITPENS 214
Query: 539 STAASSDSFGTQ-VSPVSELTDYYSNMSVNNNKP-----SSQAL--DYF 661
S A S S T+ S + +YYS N+ P SSQ L +YF
Sbjct: 215 SVAVSPASDLTEYYSAPNPNPEYYSGQMGNSYYPDQNLVSSQLLPDNYF 263
>gi|41619230|gb|AAS10054.1| MYB transcription factor [Arabidopsis thaliana]
Length = 323
Score = 266 bits (678), Expect = 1e-069
Identities = 144/229 (62%), Positives = 167/229 (72%), Gaps = 14/229 (6%)
Frame = +2
Query: 2 GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 181
GEGRWNSL+RCAGL+RTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI
Sbjct: 40 GEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 99
Query: 182 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAST 361
AQ+LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQ+A+++S
Sbjct: 100 AQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSA 159
Query: 362 APTGASSSITTAAANTYH-FNNNNNSFQAAAGAGHVALQQATLIGNNNDLAGSYTTPENS 538
A +++ TT +A T +NN F + QQ ++ NN+ Y TPEN
Sbjct: 160 AAATTTTTTTTGSAGTSSCITTSNNQFMNYDYNNNNMGQQFGVMSNND-----YITPENF 214
Query: 539 STAASSDSFGTQ-VSPVSELTDYYSNMSVNNNKP-----SSQAL--DYF 661
S A S S T+ S + +YYS N+ P SSQ L +YF
Sbjct: 215 SVAVSPASDLTEYYSAPNPNPEYYSGQMGNSYYPDQNLVSSQLLPDNYF 263
>gi|21215202|gb|AAM43912.1|AF510112_1 MYB transcription factor [Craterostigma
plantagineum]
Length = 333
Score = 265 bits (676), Expect = 3e-069
Identities = 144/222 (64%), Positives = 158/222 (71%), Gaps = 17/222 (7%)
Frame = +2
Query: 2 GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 181
GEGRWNSLAR AGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI
Sbjct: 48 GEGRWNSLARFAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 107
Query: 182 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAST 361
AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA+A+
Sbjct: 108 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQASATTDD 167
Query: 362 APTGASSSITTAAANTYHFNNNNNSFQAAAGAGHVALQ-------QATLIGNNNDLAGSY 520
A +S ++A NT + AA AG Q AT +N+ S
Sbjct: 168 GAPPAVASSPSSAMNT-------ACYSAAMAAGDHRRQFMLMPQYYATTTTTHNN---SM 217
Query: 521 TTPENSSTAASSDSFGTQVSPVSELTDYYSNMSVNNNKPSSQ 646
ENSST ASS+SFG+ S ++ +Y + V N Q
Sbjct: 218 IAQENSSTVASSESFGSLSSELTAEANYANYHRVINGADHQQ 259
>gi|1002798|gb|AAB58313.1| Cpm5 [Craterostigma plantagineum]
Length = 333
Score = 262 bits (669), Expect = 2e-068
Identities = 142/221 (64%), Positives = 156/221 (70%), Gaps = 15/221 (6%)
Frame = +2
Query: 2 GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 181
GEGRWNSLAR AGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI
Sbjct: 48 GEGRWNSLARFAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 107
Query: 182 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAST 361
AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQA+A+
Sbjct: 108 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQASATTDD 167
Query: 362 APTGASSSITTAAANTYHFNNNNNSFQAAAGAGH------VALQQATLIGNNNDLAGSYT 523
A S ++A NT + A A H + AT +N+ S
Sbjct: 168 GAPPAVVSSPSSAMNTACYTT------AMAAGDHRRQFMLMPQYYATTTTTHNN---SMI 218
Query: 524 TPENSSTAASSDSFGTQVSPVSELTDYYSNMSVNNNKPSSQ 646
ENSST ASS+SFG+ S ++ +Y + V N Q
Sbjct: 219 AQENSSTVASSESFGSLSSELTAEANYANYHRVINGADHQQ 259
>gi|147773545|emb|CAN63179.1| hypothetical protein [Vitis vinifera]
Length = 306
Score = 252 bits (643), Expect = 2e-065
Identities = 118/126 (93%), Positives = 123/126 (97%)
Frame = +2
Query: 2 GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 181
GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI
Sbjct: 41 GEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKI 100
Query: 182 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAASAST 361
AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAA+A++
Sbjct: 101 AQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATS 160
Query: 362 APTGAS 379
+ A+
Sbjct: 161 GSSPAA 166
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,768,121,326
Number of Sequences: 7387702
Number of Extensions: 127768121326
Number of Successful Extensions: 73635482
Number of sequences better than 0.0: 0
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