BLASTX 7.6.2
Query= RU04469 /QuerySize=822
(821 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157273672|gb|ABV27490.1| fasciclin-like arabinogalactan prote... 332 2e-089
gi|13377778|gb|AAK20858.1|AF333971_1 fasciclin-like arabinogalac... 307 8e-082
gi|15235459|ref|NP_193009.1| FLA2 [Arabidopsis thaliana] 307 8e-082
gi|21593810|gb|AAM65777.1| putative pollen surface protein [Arab... 307 8e-082
gi|157273656|gb|ABV27482.1| fasciclin-like arabinogalactan prote... 297 7e-079
>gi|157273672|gb|ABV27490.1| fasciclin-like arabinogalactan protein 19
[Gossypium hirsutum]
Length = 398
Score = 332 bits (850), Expect = 2e-089
Identities = 162/218 (74%), Positives = 196/218 (89%)
Frame = +3
Query: 168 SVILLLLLLSSTSQAHNITRILAKHPELSTFNHYLTVTHLAAEINRRQTITVLAIDNAAM 347
++ LLLLLL STS AHNITRILAKHPE STFNHYLT+THLA+EINRR+TITVLA++NAAM
Sbjct: 7 ALFLLLLLLFSTSNAHNITRILAKHPEFSTFNHYLTLTHLASEINRRETITVLALNNAAM 66
Query: 348 SSILAKHLSIPTLKNVLSLHVLVDYFGAKKLHQLTGGSTLTASMFQSTGTADGTTGYVNI 527
SS+L+K LS+ TLKNVLSLHVLVDYFG+KKLHQ+T G+ LT++MFQ++G A G++GY+NI
Sbjct: 67 SSLLSKQLSLYTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINI 126
Query: 528 TNLKGGKVGFGTEDNNGKLNSFYQKSVQEIPYNISVLQISQVLTSAEAEAPTAGPSDVNL 707
T+LKGGKVGFG E+N+G L++ Y KSV EIPYNISVLQISQVL SAEAEAPTA PS +NL
Sbjct: 127 TDLKGGKVGFGAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNL 186
Query: 708 TSILAKQGCKAFSDMLIATGAAATFQTNVDGGLTVFCP 821
T I++KQGCK+F+D+LI++GA ATF N+DGGLTVFCP
Sbjct: 187 TEIMSKQGCKSFADLLISSGADATFNENIDGGLTVFCP 224
>gi|13377778|gb|AAK20858.1|AF333971_1 fasciclin-like arabinogalactan-protein 2
[Arabidopsis thaliana]
Length = 403
Score = 307 bits (785), Expect = 8e-082
Identities = 157/222 (70%), Positives = 182/222 (81%)
Frame = +3
Query: 156 ALSLSVILLLLLLSSTSQAHNITRILAKHPELSTFNHYLTVTHLAAEINRRQTITVLAID 335
A +L +I L L S S AHNITRILAK P+ STFNHYL+ THLA EINRRQTITVLA+D
Sbjct: 8 ATALVLIFQLHLFLSLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVLAVD 67
Query: 336 NAAMSSILAKHLSIPTLKNVLSLHVLVDYFGAKKLHQLTGGSTLTASMFQSTGTADGTTG 515
N+AMSSIL+ S+ ++N+LSLHVLVDYFG KKLHQ+T GST TASMFQSTG+A GT+G
Sbjct: 68 NSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSG 127
Query: 516 YVNITNLKGGKVGFGTEDNNGKLNSFYQKSVQEIPYNISVLQISQVLTSAEAEAPTAGPS 695
Y+NIT++KGGKV FG +D++ KL + Y KSV E PYNISVL ISQVLTS EAEAPTA PS
Sbjct: 128 YINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEAPTASPS 187
Query: 696 DVNLTSILAKQGCKAFSDMLIATGAAATFQTNVDGGLTVFCP 821
D+ LT+IL KQGCKAFSD+L +TGA TFQ VDGGLTVFCP
Sbjct: 188 DLILTTILEKQGCKAFSDILKSTGADKTFQDTVDGGLTVFCP 229
>gi|15235459|ref|NP_193009.1| FLA2 [Arabidopsis thaliana]
Length = 403
Score = 307 bits (785), Expect = 8e-082
Identities = 157/222 (70%), Positives = 182/222 (81%)
Frame = +3
Query: 156 ALSLSVILLLLLLSSTSQAHNITRILAKHPELSTFNHYLTVTHLAAEINRRQTITVLAID 335
A +L +I L L S S AHNITRILAK P+ STFNHYL+ THLA EINRRQTITVLA+D
Sbjct: 8 ATALVLIFQLHLFLSLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVLAVD 67
Query: 336 NAAMSSILAKHLSIPTLKNVLSLHVLVDYFGAKKLHQLTGGSTLTASMFQSTGTADGTTG 515
N+AMSSIL+ S+ ++N+LSLHVLVDYFG KKLHQ+T GST TASMFQSTG+A GT+G
Sbjct: 68 NSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSG 127
Query: 516 YVNITNLKGGKVGFGTEDNNGKLNSFYQKSVQEIPYNISVLQISQVLTSAEAEAPTAGPS 695
Y+NIT++KGGKV FG +D++ KL + Y KSV E PYNISVL ISQVLTS EAEAPTA PS
Sbjct: 128 YINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEAPTASPS 187
Query: 696 DVNLTSILAKQGCKAFSDMLIATGAAATFQTNVDGGLTVFCP 821
D+ LT+IL KQGCKAFSD+L +TGA TFQ VDGGLTVFCP
Sbjct: 188 DLILTTILEKQGCKAFSDILKSTGADKTFQDTVDGGLTVFCP 229
>gi|21593810|gb|AAM65777.1| putative pollen surface protein [Arabidopsis
thaliana]
Length = 403
Score = 307 bits (785), Expect = 8e-082
Identities = 157/222 (70%), Positives = 182/222 (81%)
Frame = +3
Query: 156 ALSLSVILLLLLLSSTSQAHNITRILAKHPELSTFNHYLTVTHLAAEINRRQTITVLAID 335
A +L +I L L S S AHNITRILAK P+ STFNHYL+ THLA EINRRQTITVLA+D
Sbjct: 8 ATALVLIFQLHLFLSLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVLAVD 67
Query: 336 NAAMSSILAKHLSIPTLKNVLSLHVLVDYFGAKKLHQLTGGSTLTASMFQSTGTADGTTG 515
N+AMSSIL+ S+ ++N+LSLHVLVDYFG KKLHQ+T GST TASMFQSTG+A GT+G
Sbjct: 68 NSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSG 127
Query: 516 YVNITNLKGGKVGFGTEDNNGKLNSFYQKSVQEIPYNISVLQISQVLTSAEAEAPTAGPS 695
Y+NIT++KGGKV FG +D++ KL + Y KSV E PYNISVL ISQVLTS EAEAPTA PS
Sbjct: 128 YINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEAPTASPS 187
Query: 696 DVNLTSILAKQGCKAFSDMLIATGAAATFQTNVDGGLTVFCP 821
D+ LT+IL KQGCKAFSD+L +TGA TFQ VDGGLTVFCP
Sbjct: 188 DLILTTILEKQGCKAFSDILKSTGADKTFQDTVDGGLTVFCP 229
>gi|157273656|gb|ABV27482.1| fasciclin-like arabinogalactan protein 11
[Gossypium hirsutum]
Length = 417
Score = 297 bits (760), Expect = 7e-079
Identities = 147/221 (66%), Positives = 180/221 (81%), Gaps = 4/221 (1%)
Frame = +3
Query: 171 VILLL---LLLSSTSQAHNITRILAKHPELSTFNHYLTVTHLAAEINRRQTITVLAIDNA 341
V+LL+ LL TS AHN+TR+LAKHP LSTFNHYLT+THLA EINRR TITVLA+DNA
Sbjct: 8 VVLLIFSAFLLFQTSNAHNVTRLLAKHPSLSTFNHYLTLTHLAPEINRRTTITVLALDNA 67
Query: 342 AMSSILAKHLSIPTLKNVLSLHVLVDYFGAKKLHQLTGGSTLTASMFQSTGTADGTTGYV 521
AMSS+L K+ SI T+KN+LSLHVL+DYFGAKKLHQ+ G+ L A+MFQ+TG A G +G+V
Sbjct: 68 AMSSLLDKNPSIYTIKNILSLHVLLDYFGAKKLHQIRNGTALAATMFQATGVATGVSGFV 127
Query: 522 NITNLKGGKVGFGTEDNNGKLNSFYQKSVQEIPYNISVLQISQVLTSAEAEAPTAGPSDV 701
NIT+ KGGKVGFG EDN G LNSF+ KSV+E+PYNISV+QIS+ L S AEAPT GPS++
Sbjct: 128 NITDFKGGKVGFGAEDNGGSLNSFFVKSVEELPYNISVIQISKALPSVVAEAPTPGPSEL 187
Query: 702 NLTSILAKQGCKAFSDMLIAT-GAAATFQTNVDGGLTVFCP 821
N+T I++ GCK F+D L+A A T++ NV+GGLTVFCP
Sbjct: 188 NITGIMSAHGCKVFADTLLANPEAMGTYEDNVNGGLTVFCP 228
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,768,121,326
Number of Sequences: 7387702
Number of Extensions: 127768121326
Number of Successful Extensions: 73635482
Number of sequences better than 0.0: 0
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