BLASTX 7.6.2
Query= RU04632 /QuerySize=519
(518 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|29423813|gb|AAO73546.1| alpha-tubulin [Ceratopteris richardii] 260 3e-068
gi|134035498|gb|ABO47737.1| alpha-tubulin [Gossypium hirsutum] 260 3e-068
gi|15220329|ref|NP_171974.1| TUA4 (tubulin alpha-4 chain) [Arabi... 260 4e-068
gi|76573359|gb|ABA46784.1| alpha-tubulin-like protein [Solanum t... 260 4e-068
gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menziesi... 260 4e-068
>gi|29423813|gb|AAO73546.1| alpha-tubulin [Ceratopteris richardii]
Length = 450
Score = 260 bits (664), Expect = 3e-068
Identities = 123/123 (100%)
Frame = -3
Query: 408 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 229
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 228 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 49
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 48 RIR 40
RIR
Sbjct: 121 RIR 123
>gi|134035498|gb|ABO47737.1| alpha-tubulin [Gossypium hirsutum]
Length = 451
Score = 260 bits (664), Expect = 3e-068
Identities = 123/123 (100%)
Frame = -3
Query: 408 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 229
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 228 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 49
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 48 RIR 40
RIR
Sbjct: 121 RIR 123
>gi|15220329|ref|NP_171974.1| TUA4 (tubulin alpha-4 chain) [Arabidopsis
thaliana]
Length = 450
Score = 260 bits (663), Expect = 4e-068
Identities = 122/123 (99%), Positives = 123/123 (100%)
Frame = -3
Query: 408 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 229
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 228 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 49
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 48 RIR 40
RIR
Sbjct: 121 RIR 123
>gi|76573359|gb|ABA46784.1| alpha-tubulin-like protein [Solanum tuberosum]
Length = 237
Score = 260 bits (663), Expect = 4e-068
Identities = 122/123 (99%), Positives = 123/123 (100%)
Frame = -3
Query: 408 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 229
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 228 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 49
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 48 RIR 40
RIR
Sbjct: 121 RIR 123
>gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menziesii var.
menziesii]
Length = 451
Score = 260 bits (663), Expect = 4e-068
Identities = 122/123 (99%), Positives = 123/123 (100%)
Frame = -3
Query: 408 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 229
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 228 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 49
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 48 RIR 40
RIR
Sbjct: 121 RIR 123
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,768,121,326
Number of Sequences: 7387702
Number of Extensions: 127768121326
Number of Successful Extensions: 73635482
Number of sequences better than 0.0: 0
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