BLASTX 7.6.2
Query= RU04790 /QuerySize=335
(334 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118483220|gb|ABK93513.1| unknown [Populus trichocarpa] 203 3e-051
gi|118481692|gb|ABK92786.1| unknown [Populus trichocarpa] 203 3e-051
gi|118481898|gb|ABK92884.1| unknown [Populus trichocarpa] 201 1e-050
gi|209967449|gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia... 199 5e-050
gi|147783378|emb|CAN59887.1| hypothetical protein [Vitis vinifera] 196 4e-049
>gi|118483220|gb|ABK93513.1| unknown [Populus trichocarpa]
Length = 146
Score = 203 bits (516), Expect = 3e-051
Identities = 90/94 (95%), Positives = 93/94 (98%)
Frame = +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 230 FHKLRNKFHCPIVNLEKLWSMVPQEVKDKATKGT 331
FHKLRNKFHCPIVN++KLWSMVPQ+VKDKATK T
Sbjct: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKDKATKDT 94
>gi|118481692|gb|ABK92786.1| unknown [Populus trichocarpa]
Length = 146
Score = 203 bits (516), Expect = 3e-051
Identities = 90/94 (95%), Positives = 93/94 (98%)
Frame = +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 230 FHKLRNKFHCPIVNLEKLWSMVPQEVKDKATKGT 331
FHKLRNKFHCPIVN++KLWSMVPQ+VKDKATK T
Sbjct: 61 FHKLRNKFHCPIVNIDKLWSMVPQDVKDKATKDT 94
>gi|118481898|gb|ABK92884.1| unknown [Populus trichocarpa]
Length = 146
Score = 201 bits (510), Expect = 1e-050
Identities = 89/94 (94%), Positives = 93/94 (98%)
Frame = +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 230 FHKLRNKFHCPIVNLEKLWSMVPQEVKDKATKGT 331
FHKLRNKF+CPIVN++KLWSMVPQ+VKDKATK T
Sbjct: 61 FHKLRNKFYCPIVNIDKLWSMVPQDVKDKATKDT 94
>gi|209967449|gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii]
Length = 146
Score = 199 bits (505), Expect = 5e-050
Identities = 88/92 (95%), Positives = 92/92 (100%)
Frame = +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 230 FHKLRNKFHCPIVNLEKLWSMVPQEVKDKATK 325
FHKLRNKF+CPIVN++KLWSMVPQEVKDKA+K
Sbjct: 61 FHKLRNKFYCPIVNIDKLWSMVPQEVKDKASK 92
>gi|147783378|emb|CAN59887.1| hypothetical protein [Vitis vinifera]
Length = 146
Score = 196 bits (497), Expect = 4e-049
Identities = 86/91 (94%), Positives = 91/91 (100%)
Frame = +2
Query: 50 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 229
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 230 FHKLRNKFHCPIVNLEKLWSMVPQEVKDKAT 322
FHKLRNKF+CPIVN++KLWSMVPQ+VKDKA+
Sbjct: 61 FHKLRNKFYCPIVNIDKLWSMVPQDVKDKAS 91
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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