BLASTX 7.6.2
Query= RU04798 /QuerySize=1058
(1057 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sat... 443 2e-122
gi|147770403|emb|CAN69277.1| hypothetical protein [Vitis vinifera] 429 3e-118
gi|157342491|emb|CAO65203.1| unnamed protein product [Vitis vini... 429 3e-118
gi|132449787|gb|ABO33637.1| auxin response factor [Solanum lycop... 309 4e-082
gi|115466910|ref|NP_001057054.1| Os06g0196700 [Oryza sativa (jap... 204 1e-050
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 443 bits (1138), Expect = 2e-122
Identities = 227/335 (67%), Positives = 263/335 (78%), Gaps = 5/335 (1%)
Frame = -2
Query: 1002 QKQQQQQQQQQQQQQQQQQQLFSPSSPLLQPQMLQQQLAHQQNQQLQQLQLPLSQHHQQQ 823
++Q Q Q Q+ QQQ QQQ LFSP+SPLL PQ+LQQQ H QNQQL L LP Q Q
Sbjct: 655 EQQLQLQLLQKLQQQHQQQPLFSPASPLLPPQLLQQQHIHPQNQQLPPLPLPNQQ--QFN 712
Query: 822 LSGNSFSADKLLSSNNFSASPMMQAQHVSSIQQQNQHKPVTAIRSHSNLTEGDGPSCSTS 643
SG S +K L+SN F++ +MQ+Q V Q +Q KP TAIR++S LTEGD PSCSTS
Sbjct: 713 TSGGSLQTEK-LNSNGFASLGLMQSQQVPITQSHSQFKPTTAIRAYSGLTEGDAPSCSTS 771
Query: 642 PSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPSSNLVHDFQSKSDIRIKHELPISKGLDQ 463
PS+NNC V SNLLN+NQQG A L GD V EP++NL + SK D+RIKHE P SKGLDQ
Sbjct: 772 PSSNNCPVPVSNLLNKNQQGAATLGGDSVVEPATNLAQELHSKPDLRIKHEFPNSKGLDQ 831
Query: 462 IKYKGTITDQLEASSSGTSYCLDASTIQQNYALPSFCLDGDVQSHPRNNLPFSANVDGLA 283
+KYKGT+ DQLE SSSGTSYCLDA TIQQ LP+ CLD DVQSHPRNN+PFS ++DGL
Sbjct: 832 LKYKGTVPDQLEGSSSGTSYCLDAGTIQQALPLPT-CLDNDVQSHPRNNIPFSNSIDGLT 890
Query: 282 PDTLMSRGYDSQKDL*NLLSNY-GGTPRDIETELSTAAISSQSFGAPNMPFKPGCSSDVA 106
PDTL+SRGYDSQKDL NLLSNY GG PRDIETELSTAAISSQSFG PN+PFKPGCS+DV
Sbjct: 891 PDTLLSRGYDSQKDLQNLLSNYGGGVPRDIETELSTAAISSQSFGVPNLPFKPGCSNDVN 950
Query: 105 LNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
+N+AG L++GLW + +QR+RTYTKVQKRGSVGRCI
Sbjct: 951 INEAGALSSGLWANHSQRMRTYTKVQKRGSVGRCI 985
>gi|147770403|emb|CAN69277.1| hypothetical protein [Vitis vinifera]
Length = 1183
Score = 429 bits (1101), Expect = 3e-118
Identities = 228/354 (64%), Positives = 267/354 (75%), Gaps = 4/354 (1%)
Frame = -2
Query: 1056 QSSSQQALSEQQLHLHLLQKQQQQQQQQQQQQQQQQQQLFSPSSPLLQPQML-QQQLAHQ 880
Q +Q S QL H Q+ QQ QQ Q QQ QQ L L Q L QQQL
Sbjct: 720 QPHTQMQQSSPQLLQH-SSSQRPQQPQQPQVQQSSQQNLPEHQLQLQYLQKLQQQQLLSP 778
Query: 879 QNQQLQQLQLPLSQHHQQQLSGNSFS-ADKLLSSNNFSASPMMQAQHVSSIQQQNQHKPV 703
+ +LQ Q Q +QQ S S + + LSSN+FS S +MQ+Q + Q Q QHKP+
Sbjct: 779 VSPRLQPQQPQQQQANQQNQSLQHLSLSQQQLSSNSFSTSALMQSQQIPMNQLQGQHKPI 838
Query: 702 TAIRSHSNLTEGDGPSCSTSPSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPSSNLVHDF 523
TAIR+HS LT+GD PSCSTSPSTNNCQV SN LNRNQQG A+L+GD V EP+SNLV +
Sbjct: 839 TAIRAHSGLTDGDAPSCSTSPSTNNCQV-PSNFLNRNQQGPAILLGDSVVEPASNLVQEL 897
Query: 522 QSKSDIRIKHELPISKGLDQIKYKGTITDQLEASSSGTSYCLDASTIQQNYALPSFCLDG 343
QSKSDIRIK+E+P SK DQ++YKGT+TDQLEASSS TSYCLDA T+QQN+ LP+FCLDG
Sbjct: 898 QSKSDIRIKNEVPSSKVPDQLRYKGTVTDQLEASSSATSYCLDAGTLQQNFTLPTFCLDG 957
Query: 342 DVQSHPRNNLPFSANVDGLAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETELSTAAISS 163
DVQS+P++N PF+ N+DGL PDTL+SRG+DS KDL NLLSNYGGTPRDIETELSTAAISS
Sbjct: 958 DVQSNPQSNPPFAVNIDGLTPDTLLSRGFDSGKDLQNLLSNYGGTPRDIETELSTAAISS 1017
Query: 162 QSFGAPNMPFKPGCSSDVALNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
QSFG PNM FKPGCS+DVA+ + GVL+NGLW +QAQR+RTYTKVQKRGSVGR I
Sbjct: 1018 QSFGVPNMSFKPGCSNDVAITETGVLSNGLWTNQAQRMRTYTKVQKRGSVGRSI 1071
>gi|157342491|emb|CAO65203.1| unnamed protein product [Vitis vinifera]
Length = 1009
Score = 429 bits (1101), Expect = 3e-118
Identities = 228/354 (64%), Positives = 267/354 (75%), Gaps = 4/354 (1%)
Frame = -2
Query: 1056 QSSSQQALSEQQLHLHLLQKQQQQQQQQQQQQQQQQQQLFSPSSPLLQPQML-QQQLAHQ 880
Q +Q S QL H Q+ QQ QQ Q QQ QQ L L Q L QQQL
Sbjct: 546 QPHTQMQQSSPQLLQH-SSSQRPQQPQQPQVQQSSQQNLPEHQLQLQYLQKLQQQQLLSP 604
Query: 879 QNQQLQQLQLPLSQHHQQQLSGNSFS-ADKLLSSNNFSASPMMQAQHVSSIQQQNQHKPV 703
+ +LQ Q Q +QQ S S + + LSSN+FS S +MQ+Q + Q Q QHKP+
Sbjct: 605 VSPRLQPQQPQQQQANQQNQSLQHLSLSQQQLSSNSFSTSALMQSQQIPMNQLQGQHKPI 664
Query: 702 TAIRSHSNLTEGDGPSCSTSPSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPSSNLVHDF 523
TAIR+HS LT+GD PSCSTSPSTNNCQV SN LNRNQQG A+L+GD V EP+SNLV +
Sbjct: 665 TAIRAHSGLTDGDAPSCSTSPSTNNCQV-PSNFLNRNQQGPAILLGDSVVEPASNLVQEL 723
Query: 522 QSKSDIRIKHELPISKGLDQIKYKGTITDQLEASSSGTSYCLDASTIQQNYALPSFCLDG 343
QSKSDIRIK+E+P SK DQ++YKGT+TDQLEASSS TSYCLDA T+QQN+ LP+FCLDG
Sbjct: 724 QSKSDIRIKNEVPSSKVPDQLRYKGTVTDQLEASSSATSYCLDAGTLQQNFTLPTFCLDG 783
Query: 342 DVQSHPRNNLPFSANVDGLAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETELSTAAISS 163
DVQS+P++N PF+ N+DGL PDTL+SRG+DS KDL NLLSNYGGTPRDIETELSTAAISS
Sbjct: 784 DVQSNPQSNPPFAVNIDGLTPDTLLSRGFDSGKDLQNLLSNYGGTPRDIETELSTAAISS 843
Query: 162 QSFGAPNMPFKPGCSSDVALNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
QSFG PNM FKPGCS+DVA+ + GVL+NGLW +QAQR+RTYTKVQKRGSVGR I
Sbjct: 844 QSFGVPNMSFKPGCSNDVAITETGVLSNGLWTNQAQRMRTYTKVQKRGSVGRSI 897
>gi|132449787|gb|ABO33637.1| auxin response factor [Solanum lycopersicum]
Length = 1123
Score = 309 bits (789), Expect = 4e-082
Identities = 184/361 (50%), Positives = 226/361 (62%), Gaps = 24/361 (6%)
Frame = -2
Query: 1056 QSSSQQALSEQQLHLHLLQKQQQQQQQQQQQQQQQQQQLFSPSSPLLQPQMLQQQLAHQQ 877
Q S QQ QQ L LLQ+ Q+ Q Q QQ S + LQ Q+L +L QQ
Sbjct: 667 QKSQQQQTIPQQAPLQLLQQSLMQRSQVQPSSQQ------SLTEQQLQLQLL-NKLQQQQ 719
Query: 876 NQQLQQLQLPLS--------QHHQQQLSGNSFSADKLLSSNNFSASPMMQAQHVSSIQQQ 721
QQ QL P+S Q Q + A + LSSN + +Q+ H + Q Q
Sbjct: 720 QQQQAQLLSPVSSTLEPRMPQQQQNRQPQELQFAHQQLSSNIVTTVTHLQSTHHAFNQLQ 779
Query: 720 NQHKPVTAIRSHSNLTEGDGPSCSTSPSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPSS 541
N HK I++ S TEGD PSCSTSPSTNN QVS N L RN QG A+L+ + V +PS
Sbjct: 780 NHHKSPITIKALSGGTEGDAPSCSTSPSTNNFQVSPPNFLTRN-QGQAILVDESVVDPSQ 838
Query: 540 NLVHDFQSKSDIRIKHELPISKGLDQIKYKGTITDQLEASSSGTSYCLDASTIQQNYALP 361
Q+KS+ RIKHEL SKG + KYKG T+ LEA+SS TSY LD+S N++LP
Sbjct: 839 E-----QNKSECRIKHELVFSKGSELSKYKGNNTENLEAASSTTSYGLDSSGF--NFSLP 891
Query: 360 SFCLDGDVQSHPRNNLPFSA-NVDGLAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETEL 184
+ C+DGDVQSH RN LP +A N+DGL PD L+SR YDS KD+ NL S +G PRDIETEL
Sbjct: 892 ALCVDGDVQSHSRNILPSAANNIDGLNPDALLSRDYDSGKDIQNLFSPFGNAPRDIETEL 951
Query: 183 STAAISSQSFGAPNMPFKPGCSSDVALNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRC 4
S A I+SQ FG PNM +KP C++D+A+ND G+LNN W +Q QR+RTYTKVQKRGSVGR
Sbjct: 952 SDAGINSQQFGVPNMSYKPRCANDLAVNDNGILNNNAWTNQTQRMRTYTKVQKRGSVGRT 1011
Query: 3 I 1
I
Sbjct: 1012 I 1012
>gi|115466910|ref|NP_001057054.1| Os06g0196700 [Oryza sativa (japonica
cultivar-group)]
Length = 793
Score = 204 bits (518), Expect = 1e-050
Identities = 121/237 (51%), Positives = 157/237 (66%), Gaps = 8/237 (3%)
Frame = -2
Query: 708 PVTAIRSHSNLTEGDGPSCSTSPSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPS-SNLV 532
P +RSHS L E PS ST+PST+ ++S N L+R QG+ L D VA P NL+
Sbjct: 464 PQQLVRSHSALAESGDPSSSTAPSTS--RISPINSLSRANQGSRNLT-DMVATPQIDNLL 520
Query: 531 HDFQSKSDIRIKHELPISKGLDQIKYKGTITDQLEASSSGTSYCLDASTIQQNYALPSFC 352
+ QSK D RIK+++ SK I + ++DQL+ASS+ TS+CLD S ++ ++ P C
Sbjct: 521 QEIQSKPDNRIKNDIQ-SKETVPIHNRHPVSDQLDASSA-TSFCLDESP-REGFSFPPVC 577
Query: 351 LDGDVQSHPRNNLPFSANVDGLAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETELSTAA 172
LD +VQ PR+N + NVD L PD L+SRG S K + L S RD+E ELS+AA
Sbjct: 578 LDNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQ-RDHRDVENELSSAA 636
Query: 171 ISSQSFGAPNMPFKPGCSSDVALNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
SSQSFG P+M FKPGCSSDVA+ DAG+ + GLW +Q QR+RT+TKVQKRGSVGR I
Sbjct: 637 FSSQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTKVQKRGSVGRSI 693
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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