BLASTX 7.6.2
Query= RU04898 /QuerySize=325
(324 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|111038269|gb|ABH03531.1| class II knotted-like homeobox prote... 175 1e-042
gi|3023961|sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like... 162 9e-039
gi|15238743|ref|NP_197904.1| KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE ... 146 5e-034
gi|79328660|ref|NP_001031938.1| KNAT3 (KNOTTED1-LIKE HOMEOBOX GE... 146 5e-034
gi|21554222|gb|AAM63298.1| KNAT3 homeodomain protein [Arabidopsi... 146 5e-034
>gi|111038269|gb|ABH03531.1| class II knotted-like homeobox protein [Prunus
persica]
Length = 448
Score = 175 bits (442), Expect = 1e-042
Identities = 87/98 (88%), Positives = 90/98 (91%), Gaps = 1/98 (1%)
Frame = +1
Query: 31 NKSEGGVESGGGGGGGDGVINWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRI 210
NK++ VESGGGGG G G+INWQNARHKAEILAHP YEPLLSAHVACLRIATPVDQLPRI
Sbjct: 151 NKTDIVVESGGGGGDG-GMINWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRI 209
Query: 211 DAQLAQSQNVVAKYSGLSHGMVADDKELDQFMRHYVLL 324
DAQLAQSQNVVAKYS L HGMV DDKELDQFMRHYVLL
Sbjct: 210 DAQLAQSQNVVAKYSALGHGMVGDDKELDQFMRHYVLL 247
>gi|3023961|sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 (KNAP3)
Length = 427
Score = 162 bits (408), Expect = 9e-039
Identities = 79/97 (81%), Positives = 84/97 (86%)
Frame = +1
Query: 34 KSEGGVESGGGGGGGDGVINWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRID 213
K + + GGGG GV+NWQNARHKAEILAHP YEPLLSAHVACLRIATPVDQLPRID
Sbjct: 142 KPDSILNKNEGGGGDGGVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRID 201
Query: 214 AQLAQSQNVVAKYSGLSHGMVADDKELDQFMRHYVLL 324
AQLAQSQNVVAKYS L +GMV DDKELDQFMR+YVLL
Sbjct: 202 AQLAQSQNVVAKYSALGNGMVGDDKELDQFMRNYVLL 238
>gi|15238743|ref|NP_197904.1| KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3);
transcription factor [Arabidopsis thaliana]
Length = 431
Score = 146 bits (367), Expect = 5e-034
Identities = 75/105 (71%), Positives = 82/105 (78%), Gaps = 6/105 (5%)
Frame = +1
Query: 22 INNNKSEGGVES---GGGGGGGDGVINWQNARHKAEILAHPFYEPLLSAHVACLRIATPV 192
I GG E+ GGG DGV++WQNARHKAEIL+HP YE LLSAHVACLRIATPV
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 193 DQLPRIDAQLAQSQNVVAKYSGL---SHGMVADDKELDQFMRHYV 318
DQLPRIDAQLAQSQ+VVAKYS L + G+V DDKELDQFM HYV
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGDDKELDQFMTHYV 231
>gi|79328660|ref|NP_001031938.1| KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)
[Arabidopsis thaliana]
Length = 419
Score = 146 bits (367), Expect = 5e-034
Identities = 75/105 (71%), Positives = 82/105 (78%), Gaps = 6/105 (5%)
Frame = +1
Query: 22 INNNKSEGGVES---GGGGGGGDGVINWQNARHKAEILAHPFYEPLLSAHVACLRIATPV 192
I GG E+ GGG DGV++WQNARHKAEIL+HP YE LLSAHVACLRIATPV
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 193 DQLPRIDAQLAQSQNVVAKYSGL---SHGMVADDKELDQFMRHYV 318
DQLPRIDAQLAQSQ+VVAKYS L + G+V DDKELDQFM HYV
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGDDKELDQFMTHYV 231
>gi|21554222|gb|AAM63298.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 431
Score = 146 bits (367), Expect = 5e-034
Identities = 75/105 (71%), Positives = 82/105 (78%), Gaps = 6/105 (5%)
Frame = +1
Query: 22 INNNKSEGGVES---GGGGGGGDGVINWQNARHKAEILAHPFYEPLLSAHVACLRIATPV 192
I GG E+ GGG DGV++WQNARHKAEIL+HP YE LLSAHVACLRIATPV
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 193 DQLPRIDAQLAQSQNVVAKYSGL---SHGMVADDKELDQFMRHYV 318
DQLPRIDAQLAQSQ+VVAKYS L + G+V DDKELDQFM HYV
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGDDKELDQFMTHYV 231
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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