BLASTX 7.6.2
Query= RU05125 /QuerySize=978
(977 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|6970413|dbj|BAA90744.1| MADS-box protein [Rosa rugosa] 422 2e-116
gi|4096982|gb|AAD00025.1| AGAMOUS protein [Rosa hybrid cultivar] 421 5e-116
gi|6970417|dbj|BAA90746.1| MADS-box protein [Rosa rugosa] 417 8e-115
gi|6970415|dbj|BAA90745.1| MADS-box protein [Rosa rugosa] 416 2e-114
gi|81238288|gb|ABB59994.1| MADS-box protein [Taihangia rupestris] 384 6e-105
>gi|6970413|dbj|BAA90744.1| MADS-box protein [Rosa rugosa]
Length = 248
Score = 422 bits (1084), Expect = 2e-116
Identities = 213/214 (99%), Positives = 214/214 (100%)
Frame = -2
Query: 976 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 797
RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS
Sbjct: 35 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 94
Query: 796 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 617
SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS
Sbjct: 95 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 154
Query: 616 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSYEIMQP 437
RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSY+IMQP
Sbjct: 155 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSYDIMQP 214
Query: 436 TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 335
TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV
Sbjct: 215 TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 248
>gi|4096982|gb|AAD00025.1| AGAMOUS protein [Rosa hybrid cultivar]
Length = 248
Score = 421 bits (1081), Expect = 5e-116
Identities = 212/214 (99%), Positives = 214/214 (100%)
Frame = -2
Query: 976 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 797
RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS
Sbjct: 35 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 94
Query: 796 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 617
SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS
Sbjct: 95 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 154
Query: 616 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSYEIMQP 437
RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIA+NERHQQSINAIAGGHGSYEIMQP
Sbjct: 155 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIADNERHQQSINAIAGGHGSYEIMQP 214
Query: 436 TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 335
TQPFHEARNYFQVNAL+PNIHQYSRHDQISLQLV
Sbjct: 215 TQPFHEARNYFQVNALEPNIHQYSRHDQISLQLV 248
>gi|6970417|dbj|BAA90746.1| MADS-box protein [Rosa rugosa]
Length = 250
Score = 417 bits (1071), Expect = 8e-115
Identities = 213/216 (98%), Positives = 214/216 (99%), Gaps = 2/216 (0%)
Frame = -2
Query: 976 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 797
RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS
Sbjct: 35 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 94
Query: 796 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 617
SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS
Sbjct: 95 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 154
Query: 616 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAK--IAENERHQQSINAIAGGHGSYEIM 443
RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAK IAENERHQQSINAIAGGHGSY+IM
Sbjct: 155 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKGQIAENERHQQSINAIAGGHGSYDIM 214
Query: 442 QPTQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 335
QPTQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV
Sbjct: 215 QPTQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 250
>gi|6970415|dbj|BAA90745.1| MADS-box protein [Rosa rugosa]
Length = 249
Score = 416 bits (1067), Expect = 2e-114
Identities = 212/214 (99%), Positives = 213/214 (99%), Gaps = 1/214 (0%)
Frame = -2
Query: 973 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNN-SVRETIERYKKACADS 797
QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNN SVRETIERYKKACADS
Sbjct: 36 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSSVRETIERYKKACADS 95
Query: 796 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 617
SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS
Sbjct: 96 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 155
Query: 616 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSYEIMQP 437
RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSY+IMQP
Sbjct: 156 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGGHGSYDIMQP 215
Query: 436 TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 335
TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV
Sbjct: 216 TQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 249
>gi|81238288|gb|ABB59994.1| MADS-box protein [Taihangia rupestris]
Length = 232
Score = 384 bits (986), Expect = 6e-105
Identities = 197/217 (90%), Positives = 204/217 (94%), Gaps = 4/217 (1%)
Frame = -2
Query: 976 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADS 797
RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACAD+
Sbjct: 17 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYSNNSVRETIERYKKACADT 76
Query: 796 SNNGSVSEATTQYYQQEAAKLRAQITTLQNSNRGYMAEGLSNMSIKELKGVETKLEKAIS 617
SNNGSVSEATTQYYQQEAAKLR QIT LQN+NR YMAEGL NMS+KELK VE+KLEKAI
Sbjct: 77 SNNGSVSEATTQYYQQEAAKLRNQITALQNNNRNYMAEGLGNMSVKELKNVESKLEKAIG 136
Query: 616 RIRSKKNELLFAEIEYMQKRELDLHNNNQLLRAKIAENERHQQSINAIAGG---HGSYEI 446
+IRSKKNELLF+EIEYMQKRELDLHNNNQ+LRAKIAENERHQQSINAIAGG HGSYEI
Sbjct: 137 KIRSKKNELLFSEIEYMQKRELDLHNNNQILRAKIAENERHQQSINAIAGGGGAHGSYEI 196
Query: 445 MQPTQPFHEARNYFQVNALQPNIHQYSRHDQISLQLV 335
MQ Q FHEARNYFQVNALQPN HQYSRHDQISLQLV
Sbjct: 197 MQSAQSFHEARNYFQVNALQPN-HQYSRHDQISLQLV 232
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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