BLASTX 7.6.2
Query= RU05315 /QuerySize=994
(993 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18399690|ref|NP_566429.1| zinc finger (AN1-like) family prote... 190 3e-046
gi|195659411|gb|ACG49173.1| unknown [Zea mays] 164 2e-038
gi|118486081|gb|ABK94884.1| unknown [Populus trichocarpa] 151 8e-035
gi|157327278|emb|CAO15071.1| unnamed protein product [Vitis vini... 138 7e-031
gi|169363|gb|AAA33773.1| PVPR3 138 1e-030
>gi|18399690|ref|NP_566429.1| zinc finger (AN1-like) family protein [Arabidopsis
thaliana]
Length = 160
Score = 190 bits (480), Expect = 3e-046
Identities = 98/165 (59%), Positives = 120/165 (72%), Gaps = 16/165 (9%)
Frame = -3
Query: 805 KEETEFKVPDTLTH-----CVNNCGVTGNPATNNMCQKCFNATTAASTAAAATATTTAVF 641
KEETEFKV +TLT C NNCGVT NPATNNMCQKCFNA+ +AAA + ++
Sbjct: 7 KEETEFKVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFNASLV--SAAAGVVESGSIL 64
Query: 640 KFSGEKVPRSSSFRFDGPSETIRKAATSVESTRSEESSMRRVVNRCSGCRRKVGLTGFRC 461
K S V SS P++ + + +++ + + +++VNRCSGCR+KVGLTGFRC
Sbjct: 65 KRSARSVNLRSS-----PAKVVIR-PREIDAVKKRD---QQIVNRCSGCRKKVGLTGFRC 115
Query: 460 RCGELFCAEHRYSDRHVCSYDYKAAGREAIARENPVVKAAKIVRV 326
RCGELFC+EHRYSDRH CSYDYK AGREAIARENPVVKAAK+V+V
Sbjct: 116 RCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160
>gi|195659411|gb|ACG49173.1| unknown [Zea mays]
Length = 161
Score = 164 bits (413), Expect = 2e-038
Identities = 77/160 (48%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Frame = -3
Query: 808 EKEETEFKVPDTLTHCVNNCGVTGNPATNNMCQKCFNATTAASTAAAATATTTAVFKFSG 629
++E TE + P+ +T C NNCG GNPAT N+CQ CF+A+ + S+ +++++ S
Sbjct: 7 KEEPTELRAPE-ITLCANNCGFPGNPATQNLCQSCFSASRSPSSPTSSSSSLA-----SA 60
Query: 628 EKVPRSSSFRFDGPSETIRKAATSVESTRSEESSMRRVVNRCSGCRRKVGLTGFRCRCGE 449
PR ++ D + A + ++ E++ R +RCS CR++VGLTGFRCRCGE
Sbjct: 61 ASQPRPAALVVDAAAVEALAAPAAAAVGQATEAAARASASRCSSCRKRVGLTGFRCRCGE 120
Query: 448 LFCAEHRYSDRHVCSYDYKAAGREAIARENPVVKAAKIVR 329
LFC HRYSDRH CSYDY+ A R+AIARENPVV+AAK+VR
Sbjct: 121 LFCGAHRYSDRHGCSYDYRGAARDAIARENPVVRAAKVVR 160
>gi|118486081|gb|ABK94884.1| unknown [Populus trichocarpa]
Length = 181
Score = 151 bits (381), Expect = 8e-035
Identities = 84/149 (56%), Positives = 98/149 (65%), Gaps = 10/149 (6%)
Frame = -3
Query: 763 CVNNCGVTGNPATNNMCQKCFNATTAASTAAAAT--ATTTAVFKFSGEKVPRSSSFRFDG 590
C N T NP+++ TT T AA T +T + KF+ EK RSS R
Sbjct: 40 CFNASTSTSNPSSST------TTTTTTITFAATTNGVSTNEILKFTSEKSLRSSISRSPA 93
Query: 589 PSETIRKAATSVESTRSEESSM-RRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRH 413
R+ T+ + RS+ SS+ ++ VNRCSGCRR+VGLTGFRCRCGELFC EHRYSDRH
Sbjct: 94 KDHQ-RQPKTASDKERSDSSSVAKKEVNRCSGCRRRVGLTGFRCRCGELFCWEHRYSDRH 152
Query: 412 VCSYDYKAAGREAIARENPVVKAAKIVRV 326
CSYDYK GREAIARENPVVKAAKIVRV
Sbjct: 153 DCSYDYKTVGREAIARENPVVKAAKIVRV 181
>gi|157327278|emb|CAO15071.1| unnamed protein product [Vitis vinifera]
Length = 158
Score = 138 bits (347), Expect = 7e-031
Identities = 73/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
Frame = -3
Query: 685 ASTAAAATATTTAVFKFSGEKVPRSSSFRFDGPSETIRKAATSVESTRSEESSMRRVVNR 506
+++A+AA A K S + R S T K A S + E ++R VNR
Sbjct: 42 SASASAAAAAAAGALKSSHKLRERMDSLAETSLDRT--KDAASAAAV-EEVGKVKREVNR 98
Query: 505 CSGCRRKVGLTGFRCRCGELFCAEHRYSDRHVCSYDYKAAGREAIARENPVVKAAKIVRV 326
CSGCRRKVGLTGFRCRCG+LFCAEHRY+DRH CSYDYK AGREAIARENPVVKAAKIVRV
Sbjct: 99 CSGCRRKVGLTGFRCRCGDLFCAEHRYTDRHECSYDYKTAGREAIARENPVVKAAKIVRV 158
>gi|169363|gb|AAA33773.1| PVPR3
Length = 137
Score = 138 bits (345), Expect = 1e-030
Identities = 72/123 (58%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Frame = -3
Query: 694 TTAASTAAAATATTTAVFKFSGEKVPRSSSFRFDGPSETIRKAATSVESTRSEESSMRRV 515
T A+ AAA + + +F P +SS R S + AA + + SE +R
Sbjct: 19 TPCATATAAAATSISEPSRFFDAATPATSS-RSPKRSLPLEDAANADRTVASEP---KRA 74
Query: 514 VNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHVCSYDYKAAGREAIARENPVVKAAKI 335
VNRCSGCRR+VGLTGFRCRCG+LFCAEHRY+DRH CSYDYK GREAIARENPVVKAAKI
Sbjct: 75 VNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKTVGREAIARENPVVKAAKI 134
Query: 334 VRV 326
V+V
Sbjct: 135 VKV 137
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
|