BLASTX 7.6.2
Query= RU05335 /QuerySize=1373
(1372 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157358473|emb|CAO66140.1| unnamed protein product [Vitis vini... 422 4e-116
gi|20385588|gb|AAM21344.1|AF373603_1 MADS-box protein 4 [Vitis v... 419 3e-115
gi|126842923|gb|ABO27621.1| transcription factor MADS5 [Prunus p... 416 2e-114
gi|121309556|dbj|BAF44101.1| transcription factor MADS [Pyrus x ... 411 9e-113
gi|60100342|gb|AAX13298.1| MADS box protein SEP3 [Lotus cornicul... 398 8e-109
>gi|157358473|emb|CAO66140.1| unnamed protein product [Vitis vinifera]
Length = 242
Score = 422 bits (1084), Expect = 4e-116
Identities = 220/243 (90%), Positives = 227/243 (93%), Gaps = 4/243 (1%)
Frame = -2
Query: 1095 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 916
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 915 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP 736
SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQR+QRNLLGEDLGP
Sbjct: 61 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120
Query: 735 LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANRTLKQRLFEGYNVH 556
LS+KELESLERQLD+SLKQIRSTRTQ MLDQLTDLQRKEHMLNEAN+TLKQRL EG V+
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQVN 180
Query: 555 QLQLNANAEDVGYGRQQAHHQPQGEGFFQPLECEPTLQIGYHQNDPIQVVTAGPSV-NYM 379
QLQ N NA+DVGYGRQQA QPQG+GFF PLECEPTLQIGY Q DPI V AGPSV NYM
Sbjct: 181 QLQWNPNAQDVGYGRQQA--QPQGDGFFHPLECEPTLQIGY-QPDPITVAAAGPSVNNYM 237
Query: 378 GGW 370
GW
Sbjct: 238 PGW 240
>gi|20385588|gb|AAM21344.1|AF373603_1 MADS-box protein 4 [Vitis vinifera]
Length = 242
Score = 419 bits (1077), Expect = 3e-115
Identities = 219/243 (90%), Positives = 226/243 (93%), Gaps = 4/243 (1%)
Frame = -2
Query: 1095 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 916
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 915 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP 736
SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQ +QRNLLGEDLGP
Sbjct: 61 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQLSQRNLLGEDLGP 120
Query: 735 LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANRTLKQRLFEGYNVH 556
LS+KELESLERQLD+SLKQIRSTRTQ MLDQLTDLQRKEHMLNEAN+TLKQRL EG V+
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQVN 180
Query: 555 QLQLNANAEDVGYGRQQAHHQPQGEGFFQPLECEPTLQIGYHQNDPIQVVTAGPSV-NYM 379
QLQ N NA+DVGYGRQQA QPQG+GFF PLECEPTLQIGY Q DPI V AGPSV NYM
Sbjct: 181 QLQWNPNAQDVGYGRQQA--QPQGDGFFHPLECEPTLQIGY-QPDPITVAAAGPSVNNYM 237
Query: 378 GGW 370
GW
Sbjct: 238 PGW 240
>gi|126842923|gb|ABO27621.1| transcription factor MADS5 [Prunus persica]
Length = 240
Score = 416 bits (1069), Expect = 2e-114
Identities = 217/240 (90%), Positives = 226/240 (94%), Gaps = 6/240 (2%)
Frame = -2
Query: 1095 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 916
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLC+AEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFCSS 60
Query: 915 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP 736
SSMLKTLERYQKCNYGAPETNVS REALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP
Sbjct: 61 SSMLKTLERYQKCNYGAPETNVSAREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP 120
Query: 735 LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANRTLKQRLFEGYNVH 556
LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEAN+TLKQRLFEGY+V+
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANKTLKQRLFEGYHVN 180
Query: 555 QLQLNANAEDVGYGRQQAHHQPQGEGFFQPLECEPTLQIGYHQNDPIQVVTAGPSV-NYM 379
LQ+N NA++ YGRQQ Q G+GFF PL+CEPTLQIGY QNDPI VVTAGPSV NYM
Sbjct: 181 SLQMNPNADE--YGRQQT--QAHGDGFFHPLDCEPTLQIGY-QNDPISVVTAGPSVSNYM 235
>gi|121309556|dbj|BAF44101.1| transcription factor MADS [Pyrus x
bretschneideri]
Length = 239
Score = 411 bits (1055), Expect = 9e-113
Identities = 217/240 (90%), Positives = 226/240 (94%), Gaps = 7/240 (2%)
Frame = -2
Query: 1095 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 916
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 915 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP 736
SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKAR+EALQRNQRNLLGEDLGP
Sbjct: 61 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARFEALQRNQRNLLGEDLGP 120
Query: 735 LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANRTLKQRLFEGYNVH 556
LSSK+LESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEAN+TLK+RLFEGY H
Sbjct: 121 LSSKDLESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANKTLKERLFEGY--H 178
Query: 555 QLQLNANAEDVGYGRQQAHHQPQGEGFFQPLECEPTLQIGYHQNDPIQVVTAGPSV-NYM 379
LQLNANA++ YGRQQA QG+ FF PL+CEPTLQIGY QNDPI VVTAGPS+ NYM
Sbjct: 179 ALQLNANADE--YGRQQA-QAAQGDVFFHPLDCEPTLQIGY-QNDPISVVTAGPSLSNYM 234
>gi|60100342|gb|AAX13298.1| MADS box protein SEP3 [Lotus corniculatus var.
japonicus]
Length = 243
Score = 398 bits (1021), Expect = 8e-109
Identities = 205/245 (83%), Positives = 220/245 (89%), Gaps = 5/245 (2%)
Frame = -2
Query: 1095 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 916
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 915 SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGP 736
SSMLKTLERYQKCNYGAPE NVSTREALELSSQQEYLKLKARYEALQR+QRNL+GEDLGP
Sbjct: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
Query: 735 LSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANRTLKQRLFEGYNVH 556
L+SKELESLERQLD SLKQIRSTRTQ MLDQL+DLQRKEHML+EANR+L+QR EGY ++
Sbjct: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRQLEGYQLN 180
Query: 555 QLQLNANAEDVGYGRQQAHHQPQGEGFFQPLECEPTLQIGYHQNDPIQVVTAGPSV--NY 382
LQLN ED+GYGR A Q G+ F+ +ECEPTLQIGY Q DP+ VVTAGPS+ NY
Sbjct: 181 SLQLNPGVEDMGYGRHPA--QTHGDAFYHSIECEPTLQIGY-QPDPVSVVTAGPSMNNNY 237
Query: 381 MGGWL 367
M GWL
Sbjct: 238 MAGWL 242
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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