BLASTX 7.6.2
Query= RU05344 /QuerySize=502
(501 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|110816007|gb|ABG91751.1| HyPRP1 [Gossypium hirsutum] 111 2e-023
gi|115718526|ref|XP_001203006.1| PREDICTED: hypothetical protein... 72 2e-011
gi|76262500|gb|ABA41400.1| pherophorin-C2 protein precursor [Chl... 70 4e-011
gi|73852662|ref|YP_293946.1| hypothetical protein EhV192 [Emilia... 68 2e-010
gi|209968031|ref|YP_002296206.1| putative membrane protein [Emil... 68 2e-010
>gi|110816007|gb|ABG91751.1| HyPRP1 [Gossypium hirsutum]
Length = 326
Score = 111 bits (277), Expect = 2e-023
Identities = 60/137 (43%), Positives = 79/137 (57%), Gaps = 13/137 (9%)
Frame = -2
Query: 470 KALVFVQLSVLLLNTFTVLAQLSAIEAQAPVPSRHHGYYAHPIASPAHPPTHGHHHHHPK 291
KA + + LS+ +L++FTV +Q+ +P +HG P+ PAHPP+H HHHHHP
Sbjct: 8 KAALLLHLSLFVLSSFTVSSQI----LPEALPPHYHG--ISPVVPPAHPPSHHHHHHHPH 61
Query: 290 PHPHPPTASPVHPPAHAPVHPPTHHHHAHPPSHMPAHSPYHHAPVQPPSHPPTHHAPPAH 111
PHPHP H P +P PPT H +PP P +P + P + PS PPT +APP
Sbjct: 62 PHPHPHPHPHPHQPTPSPTKPPT-HPPVYPPPKAPKIAPV-YPPPKSPSKPPT-YAPPPK 118
Query: 110 SPAPVHPPTY--PPKKP 66
SP+ PPTY PPK P
Sbjct: 119 SPS--KPPTYAPPPKSP 133
>gi|115718526|ref|XP_001203006.1| PREDICTED: hypothetical protein, partial
[Strongylocentrotus purpuratus]
Length = 314
Score = 72 bits (174), Expect = 2e-011
Identities = 39/101 (38%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Frame = -2
Query: 329 HPPTHGHHHHHPKPHPHPPTASPVHPPAHAPVHPPTHHHHAHPPSHMPAHSPYHHAPVQP 150
H PTH + + +PP P HPP H P HP H H P+H H P HH P P
Sbjct: 1 HTPTHPLTNPSTQRSIYPPIHPPTHPPTHPPTHPTIHQLSTHQPTHPHIHPPTHH-PNHP 59
Query: 149 PSHPPTHH------APPA-HSP------APVHPPTYPPKKP 66
HPPT H APP+ HS + PPT+ P P
Sbjct: 60 SIHPPTIHPLTNPSAPPSIHSSIHPSTNQSIQPPTHHPTHP 100
>gi|76262500|gb|ABA41400.1| pherophorin-C2 protein precursor [Chlamydomonas
reinhardtii]
Length = 853
Score = 70 bits (171), Expect = 4e-011
Identities = 42/97 (43%), Positives = 43/97 (44%)
Frame = -1
Query: 348 PNSLPCPPSHSRPPPPPPQTSPTPSNRFPGPPSGSRSCPPSHSPPPRSPTFPHAGSLSLP 169
P S P PP S PPPPPP P P P PP S PP SPPP SP P S P
Sbjct: 425 PPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPP 484
Query: 168 PRSRSAPEPPSHSPRATGSLPCPGSSSYLPSQEALPT 58
P S P PPS P S P P S P P+
Sbjct: 485 PPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPS 521
>gi|73852662|ref|YP_293946.1| hypothetical protein EhV192 [Emiliania huxleyi
virus 86]
Length = 2873
Score = 68 bits (165), Expect = 2e-010
Identities = 39/91 (42%), Positives = 42/91 (46%)
Frame = -1
Query: 348 PNSLPCPPSHSRPPPPPPQTSPTPSNRFPGPPSGSRSCPPSHSPPPRSPTFPHAGSLSLP 169
P P PPS P PPPP P+P P PPS PP SPPP SP P S P
Sbjct: 2694 PPPSPPPPSPPPPSPPPPSPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPP 2753
Query: 168 PRSRSAPEPPSHSPRATGSLPCPGSSSYLPS 76
P S P PP+ SP + P P S PS
Sbjct: 2754 PPSPPPPLPPAPSPPPSPPPPSPPPSPPPPS 2784
>gi|209968031|ref|YP_002296206.1| putative membrane protein [Emiliania huxleyi
virus 86]
Length = 2857
Score = 68 bits (165), Expect = 2e-010
Identities = 39/91 (42%), Positives = 42/91 (46%)
Frame = -1
Query: 348 PNSLPCPPSHSRPPPPPPQTSPTPSNRFPGPPSGSRSCPPSHSPPPRSPTFPHAGSLSLP 169
P P PPS P PPPP P+P P PPS PP SPPP SP P S P
Sbjct: 2678 PPPSPPPPSPPPPSPPPPSPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPP 2737
Query: 168 PRSRSAPEPPSHSPRATGSLPCPGSSSYLPS 76
P S P PP+ SP + P P S PS
Sbjct: 2738 PPSPPPPLPPAPSPPPSPPPPSPPPSPPPPS 2768
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
|