BLASTX 7.6.2
Query= RU05456 /QuerySize=1236
(1235 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118489570|gb|ABK96587.1| unknown [Populus trichocarpa x Popul... 268 8e-070
gi|147811534|emb|CAN67639.1| hypothetical protein [Vitis vinifera] 263 2e-068
gi|186478716|ref|NP_001117322.1| zinc-binding family protein [Ar... 247 2e-063
gi|18394936|ref|NP_564128.1| zinc-binding family protein [Arabid... 247 2e-063
gi|21537073|gb|AAM61414.1| unknown [Arabidopsis thaliana] 245 6e-063
>gi|118489570|gb|ABK96587.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 238
Score = 268 bits (684), Expect = 8e-070
Identities = 139/205 (67%), Positives = 158/205 (77%), Gaps = 18/205 (8%)
Frame = +3
Query: 159 IFCLDCRGPALCPSCLIHHQGHHYVQIRRSSYHNVVRVSEIQRYIDISCVQTYIINSAKI 338
+FCLDC G A C CLI+H+ H VQIRRSSYHNVVRV+EIQ+YIDISCVQTYIINSAKI
Sbjct: 43 MFCLDCMGNAFCSYCLIYHKDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKI 102
Query: 339 VFLNERPQPRPGKGVTYTCEICCRSLVDAFRFCSLGCKLGGMERGDHDLSFTVRFPKATQ 518
VFLNERPQPRPGKGVT TCEICCRSL+D+FRFCSLGCKLGGM+RGD DL+F V+
Sbjct: 103 VFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFAVKL----- 157
Query: 519 MNQMYNHIRGSESDESTTPKKIAKTTQMFNRLMMG--------EGNATSSDDEATANNLS 674
+ GSESDES+TPKKI + T FNRLM G +G +S DD AT N+S
Sbjct: 158 KHNRDPFFGGSESDESSTPKKI-RRTHAFNRLMEGLSIYSSNNDGAESSGDDAAT--NIS 214
Query: 675 PSTPPLYNDRNAGRRRRKGIPHRAP 749
P+TPP++N RNA RRRKGIPHRAP
Sbjct: 215 PATPPIFNHRNA--RRRKGIPHRAP 237
>gi|147811534|emb|CAN67639.1| hypothetical protein [Vitis vinifera]
Length = 240
Score = 263 bits (672), Expect = 2e-068
Identities = 135/214 (63%), Positives = 161/214 (75%), Gaps = 25/214 (11%)
Frame = +3
Query: 159 IFCLDCRGPALCPSCLIHHQGHHYVQIRRSSYHNVVRVSEIQRYIDISCVQTYIINSAKI 338
+FCLDC G ALC CLIHH+ H VQIRRSSYHNVVRV+EIQ+YIDISCVQTY+INSAKI
Sbjct: 36 MFCLDCMGDALCSYCLIHHKDHCVVQIRRSSYHNVVRVNEIQKYIDISCVQTYVINSAKI 95
Query: 339 VFLNERPQPRPGKGVTYTCEICCRSLVDAFRFCSLGCKLGGMERGDHDLSFTVRFPKATQ 518
VFLNERPQPRPGKGVT TCEICCRSL+D+FRFCSLGCKLG M+RGD DL+F ++ +
Sbjct: 96 VFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRE 155
Query: 519 MNQMYNHIRGSESDESTTPKKIAKTTQMFNRLMM--------GEGNATSSDDEATA---- 662
GSESDES+TP+K + T +F+RLM+ G +AT + D++TA
Sbjct: 156 T------FHGSESDESSTPRKFQR-THLFSRLMIDGPTISLDGHHDATVAADKSTASSSG 208
Query: 663 ----NNLSPSTPPLYNDRNAGRRRRKGIPHRAPF 752
NN+SP+TPP++N NA RRRKGIPHRAPF
Sbjct: 209 DETINNISPATPPIFNHSNA--RRRKGIPHRAPF 240
>gi|186478716|ref|NP_001117322.1| zinc-binding family protein [Arabidopsis
thaliana]
Length = 243
Score = 247 bits (630), Expect = 2e-063
Identities = 128/213 (60%), Positives = 153/213 (71%), Gaps = 25/213 (11%)
Frame = +3
Query: 159 IFCLDCRGPALCPSCLIHHQGHHYVQIRRSSYHNVVRVSEIQRYIDISCVQTYIINSAKI 338
+FCLDC G A C CL+ H+ H VQIRRSSYHNVVRV+EIQ++IDI+CVQTYIINSAKI
Sbjct: 41 LFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKI 100
Query: 339 VFLNERPQPRPGKGVTYTCEICCRSLVDAFRFCSLGCKLGGMERGDHDLSFTVRFPKATQ 518
VFLNERPQPR GKGVT TCEICCRSL+D+FRFCSLGCKLGGM RGD L+F+++ +
Sbjct: 101 VFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGRE 160
Query: 519 MNQMYNHIRGSESDESTTPKKIAKTTQMFNRLMM---------------GEGNATSSDDE 653
++ GSESDE+TTP K+ K T FNRLM G+ ++SS DE
Sbjct: 161 ------YLGGSESDEATTPTKMRK-TNAFNRLMSGLSISTVRFDDYGPNGDQRSSSSGDE 213
Query: 654 ATANNLSPSTPPLYNDRNAGRRRRKGIPHRAPF 752
+ SP TPP+YN RN+ RRKG+PHRAPF
Sbjct: 214 G-GFSFSPGTPPIYNHRNSS--RRKGVPHRAPF 243
>gi|18394936|ref|NP_564128.1| zinc-binding family protein [Arabidopsis
thaliana]
Length = 246
Score = 247 bits (630), Expect = 2e-063
Identities = 128/213 (60%), Positives = 153/213 (71%), Gaps = 25/213 (11%)
Frame = +3
Query: 159 IFCLDCRGPALCPSCLIHHQGHHYVQIRRSSYHNVVRVSEIQRYIDISCVQTYIINSAKI 338
+FCLDC G A C CL+ H+ H VQIRRSSYHNVVRV+EIQ++IDI+CVQTYIINSAKI
Sbjct: 44 LFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKI 103
Query: 339 VFLNERPQPRPGKGVTYTCEICCRSLVDAFRFCSLGCKLGGMERGDHDLSFTVRFPKATQ 518
VFLNERPQPR GKGVT TCEICCRSL+D+FRFCSLGCKLGGM RGD L+F+++ +
Sbjct: 104 VFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGRE 163
Query: 519 MNQMYNHIRGSESDESTTPKKIAKTTQMFNRLMM---------------GEGNATSSDDE 653
++ GSESDE+TTP K+ K T FNRLM G+ ++SS DE
Sbjct: 164 ------YLGGSESDEATTPTKMRK-TNAFNRLMSGLSISTVRFDDYGPNGDQRSSSSGDE 216
Query: 654 ATANNLSPSTPPLYNDRNAGRRRRKGIPHRAPF 752
+ SP TPP+YN RN+ RRKG+PHRAPF
Sbjct: 217 G-GFSFSPGTPPIYNHRNSS--RRKGVPHRAPF 246
>gi|21537073|gb|AAM61414.1| unknown [Arabidopsis thaliana]
Length = 246
Score = 245 bits (625), Expect = 6e-063
Identities = 127/213 (59%), Positives = 153/213 (71%), Gaps = 25/213 (11%)
Frame = +3
Query: 159 IFCLDCRGPALCPSCLIHHQGHHYVQIRRSSYHNVVRVSEIQRYIDISCVQTYIINSAKI 338
+FCLDC G A C CL+ H+ H VQIRRSSYHNVVRV+EIQ++IDI+CVQT+IINSAKI
Sbjct: 44 LFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTHIINSAKI 103
Query: 339 VFLNERPQPRPGKGVTYTCEICCRSLVDAFRFCSLGCKLGGMERGDHDLSFTVRFPKATQ 518
VFLNERPQPR GKGVT TCEICCRSL+D+FRFCSLGCKLGGM RGD L+F+++ +
Sbjct: 104 VFLNERPQPRIGKGVTNTCEICCRSLLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGRE 163
Query: 519 MNQMYNHIRGSESDESTTPKKIAKTTQMFNRLMM---------------GEGNATSSDDE 653
++ GSESDE+TTP K+ K T FNRLM G+ ++SS DE
Sbjct: 164 ------YLGGSESDEATTPTKMRK-TNAFNRLMSGLSISTVRFDDYGPNGDQRSSSSGDE 216
Query: 654 ATANNLSPSTPPLYNDRNAGRRRRKGIPHRAPF 752
+ SP TPP+YN RN+ RRKG+PHRAPF
Sbjct: 217 G-GFSFSPGTPPIYNHRNSS--RRKGVPHRAPF 246
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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