BLASTX 7.6.2
Query= RU05529 /QuerySize=1348
(1347 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118486457|gb|ABK95068.1| unknown [Populus trichocarpa] 585 3e-165
gi|49617539|gb|AAT67464.1| succinyl-CoA ligase alpha 2 subunit [... 583 2e-164
gi|157355105|emb|CAO48478.1| unnamed protein product [Vitis vini... 582 2e-164
gi|118485015|gb|ABK94372.1| unknown [Populus trichocarpa] 579 2e-163
gi|27357175|gb|AAN86619.1| succinyl-CoA ligase alpha 1 subunit [... 578 4e-163
>gi|118486457|gb|ABK95068.1| unknown [Populus trichocarpa]
Length = 331
Score = 585 bits (1507), Expect = 3e-165
Identities = 293/328 (89%), Positives = 309/328 (94%), Gaps = 3/328 (0%)
Frame = +3
Query: 153 KLIGSIASRKPSSSPSTSIIQRRHYAAAPPPPAVFVDKNTRVICQGITGKNGTFHCEQAI 332
+L+ S++S+ S S S S R AA PPPPAVFVDKNTRVICQGITGKNGTFH EQAI
Sbjct: 7 RLVSSLSSKISSFSYSQS---RSFTAAPPPPPAVFVDKNTRVICQGITGKNGTFHTEQAI 63
Query: 333 EYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAE 512
EYGTKMVGGVTPKKGGTEHLGLPVFNSV+EAKAETKANASVIYVPPPFAAAAI+EA+EAE
Sbjct: 64 EYGTKMVGGVTPKKGGTEHLGLPVFNSVSEAKAETKANASVIYVPPPFAAAAILEAVEAE 123
Query: 513 LDLVVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV 692
LDLVVCITEGIPQHDMVRVKAA+ Q+KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV
Sbjct: 124 LDLVVCITEGIPQHDMVRVKAAIKKQTKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV 183
Query: 693 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLADPQTEGIVLIG 872
GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+EKFLADPQTEGIVLIG
Sbjct: 184 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVEKFLADPQTEGIVLIG 243
Query: 873 EIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 1052
EIGGTAEEDAA LIKESGTEKP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKIKTLR
Sbjct: 244 EIGGTAEEDAATLIKESGTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 303
Query: 1053 EAGVTVVESPAKIGVAMLEVFKQRGLVN 1136
+AGV VVESPAKIG AML+VFK+RGLVN
Sbjct: 304 DAGVIVVESPAKIGTAMLDVFKERGLVN 331
>gi|49617539|gb|AAT67464.1| succinyl-CoA ligase alpha 2 subunit [Lycopersicon
esculentum]
Length = 337
Score = 583 bits (1501), Expect = 2e-164
Identities = 290/337 (86%), Positives = 312/337 (92%), Gaps = 5/337 (1%)
Frame = +3
Query: 132 MGRQSLAKLIGSIASRKPSSSPSTSII----QRRHYAAAPPPPAVFVDKNTRVICQGITG 299
M RQ+ +LI +++++ SSP+ S Q R++ + PPPPAVFVDKNTRVICQGITG
Sbjct: 1 MARQA-TRLISNLSTKLNPSSPTMSASPLWHQYRYFGSPPPPPAVFVDKNTRVICQGITG 59
Query: 300 KNGTFHCEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFA 479
KNGTFH EQAIEYGTKMVGGVTPKKGGTEHLGLPVFN+VAEAK ETKANASV+YVPPPFA
Sbjct: 60 KNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKVETKANASVVYVPPPFA 119
Query: 480 AAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGI 659
AAAIMEAMEAELDLVVCITEGIPQHDMVRVKAAL Q +TRLIGPNCPGIIKPGECKIGI
Sbjct: 120 AAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALKKQLRTRLIGPNCPGIIKPGECKIGI 179
Query: 660 MPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLA 839
MPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+E+F+A
Sbjct: 180 MPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLERFIA 239
Query: 840 DPQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGK 1019
DPQTEGIVLIGEIGGTAEEDAAALIKESGT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGK
Sbjct: 240 DPQTEGIVLIGEIGGTAEEDAAALIKESGTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGK 299
Query: 1020 GTAQDKIKTLREAGVTVVESPAKIGVAMLEVFKQRGL 1130
GTAQDKIK L+EAGVTV ESPAKIGV ML+VFKQRGL
Sbjct: 300 GTAQDKIKALKEAGVTVCESPAKIGVTMLDVFKQRGL 336
>gi|157355105|emb|CAO48478.1| unnamed protein product [Vitis vinifera]
Length = 336
Score = 582 bits (1500), Expect = 2e-164
Identities = 297/332 (89%), Positives = 310/332 (93%), Gaps = 1/332 (0%)
Frame = +3
Query: 138 RQSLAKLIGSIASRKPSSSPSTSIIQRRHYAAAPPPPAVFVDKNTRVICQGITGKNGTFH 317
R + +LI SIAS K SS+ ++S R AAA PPPAVFVDKNTRVICQGITGKNGTFH
Sbjct: 4 RAAAQQLIDSIAS-KLSSATASSAQTRGFAAAAHPPPAVFVDKNTRVICQGITGKNGTFH 62
Query: 318 CEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIME 497
EQAIEYGTKMVGGVTPKKGGTEHLGLPVFN+VAEAKAETKAN SVIYVPPPFAAAAIME
Sbjct: 63 TEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANTSVIYVPPPFAAAAIME 122
Query: 498 AMEAELDLVVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIH 677
AMEAELDLVVCITEGIPQHDMV+VKAALN Q+KTRLIGPNCPGIIKPGECKIGIMPGYIH
Sbjct: 123 AMEAELDLVVCITEGIPQHDMVKVKAALNRQTKTRLIGPNCPGIIKPGECKIGIMPGYIH 182
Query: 678 KPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLADPQTEG 857
KPGRVGIVSRSGTLTYEAVFQTTAVGLGQST VGIGGDPFNGTNFVDC++KFL DPQTEG
Sbjct: 183 KPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTSVGIGGDPFNGTNFVDCIKKFLVDPQTEG 242
Query: 858 IVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDK 1037
IVLIGEIGGTAEEDAA LIKES TEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDK
Sbjct: 243 IVLIGEIGGTAEEDAAQLIKESKTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDK 302
Query: 1038 IKTLREAGVTVVESPAKIGVAMLEVFKQRGLV 1133
IKTLREAGVTVVESPAK+GVAMLE FKQ+GL+
Sbjct: 303 IKTLREAGVTVVESPAKMGVAMLEAFKQKGLI 334
>gi|118485015|gb|ABK94372.1| unknown [Populus trichocarpa]
Length = 331
Score = 579 bits (1492), Expect = 2e-163
Identities = 290/328 (88%), Positives = 308/328 (93%), Gaps = 3/328 (0%)
Frame = +3
Query: 153 KLIGSIASRKPSSSPSTSIIQRRHYAAAPPPPAVFVDKNTRVICQGITGKNGTFHCEQAI 332
+L+ S++S+ S S S S R AA PPPPAVFVDKNTRVICQGITGKNGTFH EQAI
Sbjct: 7 RLVSSLSSKISSFSYSQS---RSFTAAPPPPPAVFVDKNTRVICQGITGKNGTFHTEQAI 63
Query: 333 EYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAE 512
EYGTKMVGGVTPKKGGTEHLGLPVFNSV+EAKAETKANASVIYV PPFAAAAI+EA+EAE
Sbjct: 64 EYGTKMVGGVTPKKGGTEHLGLPVFNSVSEAKAETKANASVIYVTPPFAAAAILEAVEAE 123
Query: 513 LDLVVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV 692
LDLVVCITEGIPQHD+VRVKAA+ QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV
Sbjct: 124 LDLVVCITEGIPQHDVVRVKAAIKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV 183
Query: 693 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLADPQTEGIVLIG 872
GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC++KFLADPQTEGIVLIG
Sbjct: 184 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVKKFLADPQTEGIVLIG 243
Query: 873 EIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 1052
EIGGTAEEDAA +IKESGTEKP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKIKTLR
Sbjct: 244 EIGGTAEEDAATIIKESGTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 303
Query: 1053 EAGVTVVESPAKIGVAMLEVFKQRGLVN 1136
+AGV VVESPAKIG AML+VFK+RGLVN
Sbjct: 304 DAGVIVVESPAKIGTAMLDVFKERGLVN 331
>gi|27357175|gb|AAN86619.1| succinyl-CoA ligase alpha 1 subunit [Lycopersicon
esculentum]
Length = 332
Score = 578 bits (1489), Expect = 4e-163
Identities = 287/327 (87%), Positives = 306/327 (93%), Gaps = 1/327 (0%)
Frame = +3
Query: 153 KLIGSIASRKPSSSPSTSIIQRRHYAAAPPPPAVFVDKNTRVICQGITGKNGTFHCEQAI 332
KLI +++ + SS+P T ++ + A PPAVFVDKNTRVICQGITGKNGTFH EQAI
Sbjct: 7 KLIANLSKKLSSSNPHTRCSEQTVWIGA-APPAVFVDKNTRVICQGITGKNGTFHTEQAI 65
Query: 333 EYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAE 512
EYGTKMVGGVTPKKGGTEHLGLPVFN+V EAKAETKANASVIYVPPPFAAAAIME +EAE
Sbjct: 66 EYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAKAETKANASVIYVPPPFAAAAIMEGLEAE 125
Query: 513 LDLVVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRV 692
LDL+VCITEGIPQHDMVRVKAAL QS+TRLIGPNCPGIIKPGECKIGIMPGYIHKPGR+
Sbjct: 126 LDLIVCITEGIPQHDMVRVKAALKKQSRTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRI 185
Query: 693 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMEKFLADPQTEGIVLIG 872
GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+EKF+ADPQTEGIVLIG
Sbjct: 186 GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIG 245
Query: 873 EIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLR 1052
EIGGTAEEDAAALIKESGT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIK L+
Sbjct: 246 EIGGTAEEDAAALIKESGTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALK 305
Query: 1053 EAGVTVVESPAKIGVAMLEVFKQRGLV 1133
EAGVTV ESPAKIGV+MLEVFKQRGLV
Sbjct: 306 EAGVTVCESPAKIGVSMLEVFKQRGLV 332
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
|