BLASTX 7.6.2
Query= RU05542 /QuerySize=712
(711 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118483824|gb|ABK93804.1| unknown [Populus trichocarpa] 74 7e-012
gi|15241246|ref|NP_200465.1| AGP14 (ARABINOGALACTAN PROTEIN 14) ... 69 3e-010
gi|18400046|ref|NP_566458.1| AGP12 (ARABINOGALACTAN PROTEIN 12) ... 67 9e-010
gi|118481299|gb|ABK92593.1| unknown [Populus trichocarpa] 66 2e-009
>gi|118483824|gb|ABK93804.1| unknown [Populus trichocarpa]
Length = 59
Score = 74 bits (181), Expect = 7e-012
Identities = 39/59 (66%), Positives = 51/59 (86%), Gaps = 2/59 (3%)
Frame = +1
Query: 130 SMKMKLSVAMLVFVMVALSSIEKVAAAEAPAPSPTSDAATLFVPTFFASLAALAFGVLF 306
+MKMK+ V ++V V++A S+++K AAA+APAPSPTSD AT+FVPTF ASL ALAFG+LF
Sbjct: 3 AMKMKIFVVLMV-VLMAFSTMQKAAAADAPAPSPTSD-ATIFVPTFLASLVALAFGLLF 59
>gi|15241246|ref|NP_200465.1| AGP14 (ARABINOGALACTAN PROTEIN 14) [Arabidopsis
thaliana]
Length = 60
Score = 69 bits (167), Expect = 3e-010
Identities = 36/61 (59%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 124 MESMKMKLSVAMLVFVMVALSSIEKVAAAEAPAPSPTSDAATLFVPTFFASLAALAFGVL 303
ME+MKMKL V +LV V+ + + VAA +APAPSPTSDA++ F+PTFFAS+A +AFG
Sbjct: 1 MEAMKMKLYVVVLVAVIAFSTVHQTVAAVDAPAPSPTSDASS-FIPTFFASVAVMAFGFF 59
Query: 304 F 306
F
Sbjct: 60 F 60
>gi|18400046|ref|NP_566458.1| AGP12 (ARABINOGALACTAN PROTEIN 12) [Arabidopsis
thaliana]
Length = 60
Score = 67 bits (163), Expect = 9e-010
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Frame = +1
Query: 124 MESMKMKLSVAMLVFVMVALSSIEKVAA-AEAPAPSPTSDAATLFVPTFFASLAALAFGV 300
MESMKMKL V ++V +VA S++ VAA EAPAPSPTSDAA +FVP FAS+AALA G
Sbjct: 1 MESMKMKLIVVLMV-AIVAFSAVGNVAAQTEAPAPSPTSDAA-MFVPALFASVAALASGF 58
Query: 301 LF 306
LF
Sbjct: 59 LF 60
>gi|118481299|gb|ABK92593.1| unknown [Populus trichocarpa]
Length = 60
Score = 66 bits (160), Expect = 2e-009
Identities = 36/59 (61%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
Frame = +1
Query: 127 ESMKMKLSVAMLVFVMVALSSIEKVAAAEAPAPSPTSDAATLFVPTFFASLAALAFGVL 303
E++KM++ +A++V V++A+S+++ VAAAEAPAPSPTSDA T FVP ASL ALAFG L
Sbjct: 2 EALKMRVFLAIVV-VLMAVSAVQNVAAAEAPAPSPTSDATT-FVPAVLASLVALAFGQL 58
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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