BLASTX 7.6.2
Query= RU05648 /QuerySize=320
(319 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|4587081|dbj|BAA76607.1| BAT3 [Rattus norvegicus] 56 7e-007
gi|77020272|ref|NP_446061.2| HLA-B-associated transcript 3 isofo... 56 7e-007
gi|77020274|ref|NP_001029140.1| HLA-B-associated transcript 3 is... 56 7e-007
gi|149028084|gb|EDL83535.1| rCG38346, isoform CRA_f [Rattus norv... 56 7e-007
gi|149028086|gb|EDL83537.1| rCG38346, isoform CRA_h [Rattus norv... 56 7e-007
>gi|4587081|dbj|BAA76607.1| BAT3 [Rattus norvegicus]
Length = 1098
Score = 56 bits (133), Expect = 7e-007
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = -3
Query: 173 GPTLSNPNSHLMKPATAVHVSLMRLRLRLLP*TPPPPPPPPPPLPAPSNTTTPPLGS 3
GP+L++P + P + M L+ PPPPPPPPPP PAP TTPP GS
Sbjct: 639 GPSLASPTITVAVPGVPAFLQGMTEFLQASQAAPPPPPPPPPPPPAPEQQTTPPPGS 695
>gi|77020272|ref|NP_446061.2| HLA-B-associated transcript 3 isoform 2 [Rattus
norvegicus]
Length = 1096
Score = 56 bits (133), Expect = 7e-007
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = -3
Query: 173 GPTLSNPNSHLMKPATAVHVSLMRLRLRLLP*TPPPPPPPPPPLPAPSNTTTPPLGS 3
GP+L++P + P + M L+ PPPPPPPPPP PAP TTPP GS
Sbjct: 637 GPSLASPTITVAVPGVPAFLQGMTEFLQASQAAPPPPPPPPPPPPAPEQQTTPPPGS 693
>gi|77020274|ref|NP_001029140.1| HLA-B-associated transcript 3 isoform 1 [Rattus
norvegicus]
Length = 1146
Score = 56 bits (133), Expect = 7e-007
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = -3
Query: 173 GPTLSNPNSHLMKPATAVHVSLMRLRLRLLP*TPPPPPPPPPPLPAPSNTTTPPLGS 3
GP+L++P + P + M L+ PPPPPPPPPP PAP TTPP GS
Sbjct: 638 GPSLASPTITVAVPGVPAFLQGMTEFLQASQAAPPPPPPPPPPPPAPEQQTTPPPGS 694
>gi|149028084|gb|EDL83535.1| rCG38346, isoform CRA_f [Rattus norvegicus]
Length = 1097
Score = 56 bits (133), Expect = 7e-007
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = -3
Query: 173 GPTLSNPNSHLMKPATAVHVSLMRLRLRLLP*TPPPPPPPPPPLPAPSNTTTPPLGS 3
GP+L++P + P + M L+ PPPPPPPPPP PAP TTPP GS
Sbjct: 638 GPSLASPTITVAVPGVPAFLQGMTEFLQASQAAPPPPPPPPPPPPAPEQQTTPPPGS 694
>gi|149028086|gb|EDL83537.1| rCG38346, isoform CRA_h [Rattus norvegicus]
Length = 1139
Score = 56 bits (133), Expect = 7e-007
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = -3
Query: 173 GPTLSNPNSHLMKPATAVHVSLMRLRLRLLP*TPPPPPPPPPPLPAPSNTTTPPLGS 3
GP+L++P + P + M L+ PPPPPPPPPP PAP TTPP GS
Sbjct: 638 GPSLASPTITVAVPGVPAFLQGMTEFLQASQAAPPPPPPPPPPPPAPEQQTTPPPGS 694
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,862,090,769
Number of Sequences: 7387702
Number of Extensions: 168862090769
Number of Successful Extensions: 83690393
Number of sequences better than 0.0: 0
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