BLASTX 7.6.2
Query= RU05884 /QuerySize=924
(923 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|87241115|gb|ABD32973.1| Tubby; Cyclin-like F-box [Medicago tr... 240 2e-061
gi|75251373|sp|Q5QM27.1|TLP1_ORYSJ RecName: Full=Tubby-like F-bo... 238 6e-061
gi|18404413|ref|NP_564627.1| AtTLP7 (TUBBY LIKE PROTEIN 7); phos... 237 1e-060
gi|212722972|ref|NP_001132270.1| hypothetical protein LOC1001937... 231 1e-058
gi|195642242|gb|ACG40589.1| unknown [Zea mays] 231 1e-058
>gi|87241115|gb|ABD32973.1| Tubby; Cyclin-like F-box [Medicago truncatula]
Length = 371
Score = 240 bits (610), Expect = 2e-061
Identities = 121/169 (71%), Positives = 140/169 (82%), Gaps = 8/169 (4%)
Frame = +2
Query: 419 KTNKKTSTFYLYLALTPSFTDKGKFLLAARRYRRGSHTEYIISLDAEDISQGSNAYVGKL 598
K +KKTSTFYLYLALT SF+DKGKFLLAARRYR G+HTEY ISLDA+D+SQGSNAYVGKL
Sbjct: 118 KRSKKTSTFYLYLALTSSFSDKGKFLLAARRYRCGTHTEYAISLDADDLSQGSNAYVGKL 177
Query: 599 SSDFLGTNFTIYDSQPPHSGAKPASRRSRRRFASKQISPQVPAGNFEVGQVSYRFNLLKS 778
SSDFLGTNFTIYDSQPPH+GAKP+ R+ RRFASKQISPQVPAGNFE G VSY+FNLLKS
Sbjct: 178 SSDFLGTNFTIYDSQPPHNGAKPSCARASRRFASKQISPQVPAGNFEAGDVSYKFNLLKS 237
Query: 779 RGPRRMICPLN--CPASGGSGNS------EMKKPDYGSGHNTVLRNKAP 901
RGPRRM+C L P+ G S +S +M ++ + +T+L+NKAP
Sbjct: 238 RGPRRMMCSLKFPVPSVGESSDSKSFDGQKMHSKEHAASAHTILKNKAP 286
>gi|75251373|sp|Q5QM27.1|TLP1_ORYSJ RecName: Full=Tubby-like F-box protein 1;
Short=OsTLP1; AltName: Full=Tubby-like F-box protein 9; Short=OsTLP9
Length = 356
Score = 238 bits (606), Expect = 6e-061
Identities = 116/175 (66%), Positives = 137/175 (78%)
Frame = +2
Query: 398 FPASMSNKTNKKTSTFYLYLALTPSFTDKGKFLLAARRYRRGSHTEYIISLDAEDISQGS 577
FP K NKK STFYLYL LT + DKGKFL+AARR+RRG HTEYI+SLDA+D+SQGS
Sbjct: 104 FPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFLMAARRFRRGPHTEYIVSLDADDLSQGS 163
Query: 578 NAYVGKLSSDFLGTNFTIYDSQPPHSGAKPASRRSRRRFASKQISPQVPAGNFEVGQVSY 757
NAY+GKL SDF GTNF IYDS+PP+ GAK +S RS RRF S++ISPQV AGN+EVGQVSY
Sbjct: 164 NAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSY 223
Query: 758 RFNLLKSRGPRRMICPLNCPASGGSGNSEMKKPDYGSGHNTVLRNKAPRWHDQLQ 922
++NLLKSRGPRRM C L CP++ + + +K NTVLRNKAPRWH+ LQ
Sbjct: 224 KYNLLKSRGPRRMYCALECPSTQETWENCLKTKFRKPTGNTVLRNKAPRWHEHLQ 278
>gi|18404413|ref|NP_564627.1| AtTLP7 (TUBBY LIKE PROTEIN 7); phosphoric diester
hydrolase/ transcription factor [Arabidopsis thaliana]
Length = 379
Score = 237 bits (603), Expect = 1e-060
Identities = 119/160 (74%), Positives = 134/160 (83%), Gaps = 8/160 (5%)
Frame = +2
Query: 401 PASMSN----KTNKKTSTFYLYLALTPSFTDKGKFLLAARRYRRGSHTEYIISLDAEDIS 568
P SN K NKKTSTFYLYLALTPSFTDKGKFLLAARR+R G++TEYIISLDA+D S
Sbjct: 110 PRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFS 169
Query: 569 QGSNAYVGKLSSDFLGTNFTIYDSQPPHSGAKPASRRSRRRFASKQISPQVPAGNFEVGQ 748
QGSNAYVGKL SDFLGTNFT+YDSQPPH+GAKP++ ++ RRFASKQISPQVPAGNFEVG
Sbjct: 170 QGSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEVGH 229
Query: 749 VSYRFNLLKSRGPRRMI----CPLNCPASGGSGNSEMKKP 856
VSY+FNLLKSRGPRRM+ CP P+S +G S +KP
Sbjct: 230 VSYKFNLLKSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKP 269
>gi|212722972|ref|NP_001132270.1| hypothetical protein LOC100193706 [Zea mays]
Length = 358
Score = 231 bits (587), Expect = 1e-058
Identities = 113/168 (67%), Positives = 131/168 (77%)
Frame = +2
Query: 419 KTNKKTSTFYLYLALTPSFTDKGKFLLAARRYRRGSHTEYIISLDAEDISQGSNAYVGKL 598
K NK STFYLYL T S DKGKFL+AARR+RRG HTEYIISLDAED+SQGSNAY+GKL
Sbjct: 113 KRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKL 172
Query: 599 SSDFLGTNFTIYDSQPPHSGAKPASRRSRRRFASKQISPQVPAGNFEVGQVSYRFNLLKS 778
SDF GTNF IYDS+PP+ GAK +S RS RRF S++ISPQV AGN+EVGQVSY++NLLKS
Sbjct: 173 RSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKS 232
Query: 779 RGPRRMICPLNCPASGGSGNSEMKKPDYGSGHNTVLRNKAPRWHDQLQ 922
RGPRRM C L CP++ + + +K T LRNKAPRWH+ LQ
Sbjct: 233 RGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQ 280
>gi|195642242|gb|ACG40589.1| unknown [Zea mays]
Length = 358
Score = 231 bits (587), Expect = 1e-058
Identities = 113/168 (67%), Positives = 131/168 (77%)
Frame = +2
Query: 419 KTNKKTSTFYLYLALTPSFTDKGKFLLAARRYRRGSHTEYIISLDAEDISQGSNAYVGKL 598
K NK STFYLYL T S DKGKFL+AARR+RRG HTEYIISLDAED+SQGSNAY+GKL
Sbjct: 113 KRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKL 172
Query: 599 SSDFLGTNFTIYDSQPPHSGAKPASRRSRRRFASKQISPQVPAGNFEVGQVSYRFNLLKS 778
SDF GTNF IYDS+PP+ GAK +S RS RRF S++ISPQV AGN+EVGQVSY++NLLKS
Sbjct: 173 RSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKS 232
Query: 779 RGPRRMICPLNCPASGGSGNSEMKKPDYGSGHNTVLRNKAPRWHDQLQ 922
RGPRRM C L CP++ + + +K T LRNKAPRWH+ LQ
Sbjct: 233 RGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQ 280
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,589,088,269
Number of Sequences: 7387702
Number of Extensions: 175589088269
Number of Successful Extensions: 90963865
Number of sequences better than 0.0: 0
|