BLASTX 7.6.2
Query= RU05885 /QuerySize=473
(472 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|87241115|gb|ABD32973.1| Tubby; Cyclin-like F-box [Medicago tr... 166 4e-040
gi|157338362|emb|CAO39406.1| unnamed protein product [Vitis vini... 156 4e-037
gi|87241116|gb|ABD32974.1| Tubby; Cyclin-like F-box [Medicago tr... 156 5e-037
gi|7769867|gb|AAF69545.1|AC008007_20 F12M16.22 [Arabidopsis thal... 153 5e-036
gi|18404413|ref|NP_564627.1| AtTLP7 (TUBBY LIKE PROTEIN 7); phos... 150 3e-035
>gi|87241115|gb|ABD32973.1| Tubby; Cyclin-like F-box [Medicago truncatula]
Length = 371
Score = 166 bits (419), Expect = 4e-040
Identities = 78/111 (70%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = +3
Query: 141 DSAELDRVSDSVEST-ASSWSTLLPELLGEIIHRVEDSEDKWPHRQNVVACACVCKRWRD 317
D+ DR ES + WST+LP+LL EII RV+ +E++WPHRQNVVACACVCKRWRD
Sbjct: 23 DTVADDRRDAGGESADGTDWSTMLPDLLAEIIKRVDVAEEQWPHRQNVVACACVCKRWRD 82
Query: 318 ITMEIVRTPSANGRITFPSCLKQPGPSDFPHQCLIKRNKKTSTFYLYLALT 470
IT EIV++P NG ITFPSCLKQPGP D PH CLIKR+KKTSTFYLYLALT
Sbjct: 83 ITREIVKSPQRNGTITFPSCLKQPGPRDLPHHCLIKRSKKTSTFYLYLALT 133
>gi|157338362|emb|CAO39406.1| unnamed protein product [Vitis vinifera]
Length = 210
Score = 156 bits (393), Expect = 4e-037
Identities = 71/93 (76%), Positives = 82/93 (88%)
Frame = +3
Query: 192 SWSTLLPELLGEIIHRVEDSEDKWPHRQNVVACACVCKRWRDITMEIVRTPSANGRITFP 371
SWST+LPELLGEII RVE SE++WP R+NVV+CACVCKRWRDIT E+VR+ +G+ITFP
Sbjct: 73 SWSTMLPELLGEIIQRVEASENRWPTRRNVVSCACVCKRWRDITREVVRSRLDSGQITFP 132
Query: 372 SCLKQPGPSDFPHQCLIKRNKKTSTFYLYLALT 470
SCLKQPGP + HQCLIKRNKK STFYLYLAL+
Sbjct: 133 SCLKQPGPRNSEHQCLIKRNKKNSTFYLYLALS 165
>gi|87241116|gb|ABD32974.1| Tubby; Cyclin-like F-box [Medicago truncatula]
Length = 367
Score = 156 bits (392), Expect = 5e-037
Identities = 70/109 (64%), Positives = 84/109 (77%)
Frame = +3
Query: 144 SAELDRVSDSVESTASSWSTLLPELLGEIIHRVEDSEDKWPHRQNVVACACVCKRWRDIT 323
+A D S + WST+LPE+L +II RV+ ++WPHR+NVVACACVCKRWRDIT
Sbjct: 20 NATNDDTVGSESEDKTDWSTMLPEVLADIIKRVDVIGEQWPHRRNVVACACVCKRWRDIT 79
Query: 324 MEIVRTPSANGRITFPSCLKQPGPSDFPHQCLIKRNKKTSTFYLYLALT 470
E+V +PS NG+ITFPSCLKQPGP D PH C++ NKKTSTFYLYLALT
Sbjct: 80 REVVGSPSLNGKITFPSCLKQPGPRDLPHHCVVNWNKKTSTFYLYLALT 128
>gi|7769867|gb|AAF69545.1|AC008007_20 F12M16.22 [Arabidopsis thaliana]
Length = 579
Score = 153 bits (384), Expect = 5e-036
Identities = 83/149 (55%), Positives = 102/149 (68%), Gaps = 5/149 (3%)
Frame = +3
Query: 24 TRRAMSLRKSFLSRKFSKSFREFNGSQARGGGGDRRVVHDSAELDRVSDSVESTASSWST 203
T R +SL K LSR S R + S R G+ +S + S+ S SSWS
Sbjct: 159 TNRNISLHKMPLSR--SLLSRRISNS-FRFHQGETTTAPESESIPPPSNMAGS--SSWSA 213
Query: 204 LLPELLGEIIHRVEDSEDKWPHRQNVVACACVCKRWRDITMEIVRTPSANGRITFPSCLK 383
+LPELLGEII RVE++ED+WP R++VV CACV K+WR+IT + R+ +G+ITFPSCLK
Sbjct: 214 MLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLK 273
Query: 384 QPGPSDFPHQCLIKRNKKTSTFYLYLALT 470
PGP DF +QCLIKRNKKTSTFYLYLALT
Sbjct: 274 LPGPRDFSNQCLIKRNKKTSTFYLYLALT 302
>gi|18404413|ref|NP_564627.1| AtTLP7 (TUBBY LIKE PROTEIN 7); phosphoric diester
hydrolase/ transcription factor [Arabidopsis thaliana]
Length = 379
Score = 150 bits (377), Expect = 3e-035
Identities = 67/95 (70%), Positives = 81/95 (85%)
Frame = +3
Query: 186 ASSWSTLLPELLGEIIHRVEDSEDKWPHRQNVVACACVCKRWRDITMEIVRTPSANGRIT 365
+SSWS +LPELLGEII RVE++ED+WP R++VV CACV K+WR+IT + R+ +G+IT
Sbjct: 41 SSSWSAMLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKIT 100
Query: 366 FPSCLKQPGPSDFPHQCLIKRNKKTSTFYLYLALT 470
FPSCLK PGP DF +QCLIKRNKKTSTFYLYLALT
Sbjct: 101 FPSCLKLPGPRDFSNQCLIKRNKKTSTFYLYLALT 135
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,589,088,269
Number of Sequences: 7387702
Number of Extensions: 175589088269
Number of Successful Extensions: 90963865
Number of sequences better than 0.0: 0
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