BLASTX 7.6.2
Query= RU05949 /QuerySize=1467
(1466 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157327254|emb|CAO14549.1| unnamed protein product [Vitis vini... 352 4e-095
gi|111378451|gb|ABH09237.1| CONSTANS-like protein [Solanum tuber... 176 5e-042
gi|52840166|sp|Q940T9.2|COL4_ARATH RecName: Full=Zinc finger pro... 175 1e-041
gi|30689668|ref|NP_197875.2| zinc finger (B-box type) family pro... 175 1e-041
gi|15450659|gb|AAK96601.1| AT5g24930/F6A4_140 [Arabidopsis thali... 175 1e-041
>gi|157327254|emb|CAO14549.1| unnamed protein product [Vitis vinifera]
Length = 338
Score = 352 bits (903), Expect = 4e-095
Identities = 200/353 (56%), Positives = 239/353 (67%), Gaps = 39/353 (11%)
Frame = -2
Query: 1369 LTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVT 1190
+ K CD+CKS+P +FCRADSA+LC+ CDSK+H ANKLASRH RVWMCEVCEQAPA VT
Sbjct: 1 MASKLCDSCKSAPPTLFCRADSAFLCVACDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60
Query: 1189 CKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGL--------ND 1034
CKADAAALCVTCD DIHSANPLARRHERVPV PF DSA + KS + L D
Sbjct: 61 CKADAAALCVTCDRDIHSANPLARRHERVPVVPFYDSAAAAAKSNAVNLLVDDRYYSDPD 120
Query: 1033 AVSSLKNDDADSLLIPNLNFSSKFIEALDVKPGDMFFPEMESLFELDYP-------NPIQ 875
+S + +A S L+PN N K E+ D+ F +++ +LDYP + Q
Sbjct: 121 GDASREEAEAASWLLPNPN--PKLAESSDLNSSHYMFSDIDPYLDLDYPSMDPKLQSQQQ 178
Query: 874 NSSSGMDSVVPVQPDPIPPPPVVNQPPRENCFDIDFCRNKLSSSFSYPAQSISQSVSSSS 695
SSG D VVPVQ + P V +NCFD+DF +K SF Y QS+SQSVSSSS
Sbjct: 179 QQSSGTDGVVPVQNKSVQAPLV-----NDNCFDMDFSGSK---SF-YNGQSLSQSVSSSS 229
Query: 694 LDVGVVPDGNSLSDISYPFIRNVNHNGVESGVAAAPATATATQLSGVDREARVMRYREKR 515
L+VGVVPDGN++ D++ PF R++N G ES A TA SG+DREARV+RYREKR
Sbjct: 230 LEVGVVPDGNAMVDVTNPFGRSMN-TGSES------ANQTAQISSGIDREARVLRYREKR 282
Query: 514 KNRKFQKTIRYASRKAYAETRPRIKGRFAKRTETETEVMDRIFNSAPGSYIAD 356
KNRKF+KTIRYASRKAYAETRPRIKGRFAKR+E E + S+ G+ AD
Sbjct: 283 KNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEIEVDY------SSSGALTAD 329
>gi|111378451|gb|ABH09237.1| CONSTANS-like protein [Solanum tuberosum]
Length = 360
Score = 176 bits (445), Expect = 5e-042
Identities = 87/125 (69%), Positives = 96/125 (76%), Gaps = 3/125 (2%)
Frame = -2
Query: 1369 LTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVT 1190
LT K CD+CK++P+ VFCRADSA+LCL CD KIH ANKLASRH RVW+CEVCEQAPA VT
Sbjct: 8 LTAKLCDSCKTTPATVFCRADSAFLCLGCDCKIHAANKLASRHARVWVCEVCEQAPAVVT 67
Query: 1189 CKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAESIVKSTSAAGLN-DAVSSLKN 1013
CKADAAALCVTCD DIHSANPLARRHER PV PF DSA + KS + DA K
Sbjct: 68 CKADAAALCVTCDRDIHSANPLARRHERFPVVPFYDSA--VAKSDGGGDADADAADDEKY 125
Query: 1012 DDADS 998
D+ S
Sbjct: 126 FDSTS 130
>gi|52840166|sp|Q940T9.2|COL4_ARATH RecName: Full=Zinc finger protein
CONSTANS-LIKE 4
Length = 362
Score = 175 bits (442), Expect = 1e-041
Identities = 83/118 (70%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
Frame = -2
Query: 1369 LTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVT 1190
+ K CD+CKS+ +A++CR D+A+LCL+CDSK+H ANKLASRH RVWMCEVCEQAPA VT
Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60
Query: 1189 CKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAES--IVKSTSAAGLNDAVSS 1022
CKADAAALCVTCD DIHSANPLARRHERVPV PF DS S VK T+ L+D S
Sbjct: 61 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFS 118
>gi|30689668|ref|NP_197875.2| zinc finger (B-box type) family protein
[Arabidopsis thaliana]
Length = 406
Score = 175 bits (442), Expect = 1e-041
Identities = 83/118 (70%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
Frame = -2
Query: 1369 LTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVT 1190
+ K CD+CKS+ +A++CR D+A+LCL+CDSK+H ANKLASRH RVWMCEVCEQAPA VT
Sbjct: 45 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 104
Query: 1189 CKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAES--IVKSTSAAGLNDAVSS 1022
CKADAAALCVTCD DIHSANPLARRHERVPV PF DS S VK T+ L+D S
Sbjct: 105 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFS 162
>gi|15450659|gb|AAK96601.1| AT5g24930/F6A4_140 [Arabidopsis thaliana]
Length = 232
Score = 175 bits (442), Expect = 1e-041
Identities = 83/118 (70%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
Frame = -2
Query: 1369 LTPKPCDTCKSSPSAVFCRADSAYLCLTCDSKIHCANKLASRHQRVWMCEVCEQAPAAVT 1190
+ K CD+CKS+ +A++CR D+A+LCL+CDSK+H ANKLASRH RVWMCEVCEQAPA VT
Sbjct: 1 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60
Query: 1189 CKADAAALCVTCDADIHSANPLARRHERVPVEPFLDSAES--IVKSTSAAGLNDAVSS 1022
CKADAAALCVTCD DIHSANPLARRHERVPV PF DS S VK T+ L+D S
Sbjct: 61 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFS 118
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
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