BLASTX 7.6.2
Query= RU05974 /QuerySize=806
(805 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118484605|gb|ABK94176.1| unknown [Populus trichocarpa] 304 5e-081
gi|118487400|gb|ABK95528.1| unknown [Populus trichocarpa] 304 5e-081
gi|183013548|gb|ACC38297.1| E2 ubiquitin-conjugating enzyme UBC1... 304 5e-081
gi|18423494|ref|NP_568788.1| UBC10 (UBIQUITIN-CONJUGATING ENZYME... 303 1e-080
gi|30687803|ref|NP_849462.1| UBC9 (UBIQUITIN CONJUGATING ENZYME ... 302 2e-080
>gi|118484605|gb|ABK94176.1| unknown [Populus trichocarpa]
Length = 148
Score = 304 bits (778), Expect = 5e-081
Identities = 144/148 (97%), Positives = 145/148 (97%)
Frame = +2
Query: 95 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY 274
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60
Query: 275 PFKPPKVAFRTKVFHPNIFINGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 454
PFKPPKVAFRTKVFHPNI NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 455 PEIAHMYKTDKNKYETTARSWTQKYAMG 538
PEIAHMYKTD+NKYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRNKYETTARSWTQKYAMG 148
>gi|118487400|gb|ABK95528.1| unknown [Populus trichocarpa]
Length = 148
Score = 304 bits (778), Expect = 5e-081
Identities = 144/148 (97%), Positives = 146/148 (98%)
Frame = +2
Query: 95 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY 274
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY 60
Query: 275 PFKPPKVAFRTKVFHPNIFINGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 454
PFKPPKVAFRTKVFHPNI NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 455 PEIAHMYKTDKNKYETTARSWTQKYAMG 538
PEIAHMYKTD++KYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYETTARSWTQKYAMG 148
>gi|183013548|gb|ACC38297.1| E2 ubiquitin-conjugating enzyme UBC10 [Brassica
napus]
Length = 148
Score = 304 bits (778), Expect = 5e-081
Identities = 144/148 (97%), Positives = 145/148 (97%)
Frame = +2
Query: 95 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY 274
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVTIHFPPDY 60
Query: 275 PFKPPKVAFRTKVFHPNIFINGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 454
PFKPPKVAFRTKVFHPNI NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 455 PEIAHMYKTDKNKYETTARSWTQKYAMG 538
PEIAHMYKTDKNKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
>gi|18423494|ref|NP_568788.1| UBC10 (UBIQUITIN-CONJUGATING ENZYME 10);
ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 148
Score = 303 bits (775), Expect = 1e-080
Identities = 143/148 (96%), Positives = 146/148 (98%)
Frame = +2
Query: 95 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY 274
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPYAGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 275 PFKPPKVAFRTKVFHPNIFINGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 454
PFKPPKVAFRTKVFHPNI NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 455 PEIAHMYKTDKNKYETTARSWTQKYAMG 538
PEIAHMYKTDKNKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
>gi|30687803|ref|NP_849462.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9);
ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 148
Score = 302 bits (773), Expect = 2e-080
Identities = 142/148 (95%), Positives = 146/148 (98%)
Frame = +2
Query: 95 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDY 274
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 275 PFKPPKVAFRTKVFHPNIFINGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 454
PFKPPKVAFRTKVFHPNI NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 455 PEIAHMYKTDKNKYETTARSWTQKYAMG 538
PEIAHMYKTDKNKYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
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