BLASTX 7.6.2
Query= RU05988 /QuerySize=1038
(1037 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147828007|emb|CAN70795.1| hypothetical protein [Vitis vinifera] 259 4e-067
gi|157328503|emb|CAO21210.1| unnamed protein product [Vitis vini... 259 4e-067
gi|147798735|emb|CAN61076.1| hypothetical protein [Vitis vinifera] 252 4e-065
gi|147834100|emb|CAN64334.1| hypothetical protein [Vitis vinifera] 248 9e-064
gi|15238156|ref|NP_199575.1| CCAAT-box binding transcription fac... 232 5e-059
>gi|147828007|emb|CAN70795.1| hypothetical protein [Vitis vinifera]
Length = 218
Score = 259 bits (660), Expect = 4e-067
Identities = 142/215 (66%), Positives = 153/215 (71%), Gaps = 23/215 (10%)
Frame = +1
Query: 277 MADSDNDSGGG-HNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETV 453
MADSDNDSGG +N+ GG SELS REQDRLLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1 MADSDNDSGGAQNNNSGGNVNSELSAREQDRLLPIANVSRIMKKALPANAKISKDAKETV 60
Query: 454 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 633
QECVSEFISF+TGEASDKCQREKRKTINGDDLLWAM TLGFEEYVEPLKVYLQ+FRE+EG
Sbjct: 61 QECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMMTLGFEEYVEPLKVYLQKFREVEG 120
Query: 634 EKSSMAARDKDPSGGVVVFEGAGSGGGGGGGGGV--------YWQQPQPQPQQQQPQPHQ 789
EK+++ G V +G GS G GG GG V Y Q Q HQ
Sbjct: 121 EKTAV--------GRQVEKDGGGSSGDGGNGGVVNTGNFGSGYGAMQQTMMMMGHHQHHQ 172
Query: 790 GHVYGGGGFHQMGVGI------GKGGPGSNMGRPR 876
GHVYG G +HQMG G G G+ GRPR
Sbjct: 173 GHVYGSGSYHQMGSGSRPTSGGSSSGGGAATGRPR 207
>gi|157328503|emb|CAO21210.1| unnamed protein product [Vitis vinifera]
Length = 207
Score = 259 bits (660), Expect = 4e-067
Identities = 142/215 (66%), Positives = 153/215 (71%), Gaps = 23/215 (10%)
Frame = +1
Query: 277 MADSDNDSGGG-HNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETV 453
MADSDNDSGG +N+ GG SELS REQDRLLPIANVSRIMKKALPANAKISKDAKETV
Sbjct: 1 MADSDNDSGGAQNNNSGGNVNSELSAREQDRLLPIANVSRIMKKALPANAKISKDAKETV 60
Query: 454 QECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEG 633
QECVSEFISF+TGEASDKCQREKRKTINGDDLLWAM TLGFEEYVEPLKVYLQ+FRE+EG
Sbjct: 61 QECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMMTLGFEEYVEPLKVYLQKFREVEG 120
Query: 634 EKSSMAARDKDPSGGVVVFEGAGSGGGGGGGGGV--------YWQQPQPQPQQQQPQPHQ 789
EK+++ G V +G GS G GG GG V Y Q Q HQ
Sbjct: 121 EKTAV--------GRQVEKDGGGSSGDGGNGGVVNTGNFGSGYGAMQQTMMMMGHHQHHQ 172
Query: 790 GHVYGGGGFHQMGVGI------GKGGPGSNMGRPR 876
GHVYG G +HQMG G G G+ GRPR
Sbjct: 173 GHVYGSGSYHQMGSGSRPTSGGSSSGGGAATGRPR 207
>gi|147798735|emb|CAN61076.1| hypothetical protein [Vitis vinifera]
Length = 459
Score = 252 bits (643), Expect = 4e-065
Identities = 142/209 (67%), Positives = 151/209 (72%), Gaps = 25/209 (11%)
Frame = +1
Query: 277 MADSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ 456
MADSDNDSGG +NS SELS REQDR LPIANVSRIMKKALPANAKISKDAKETVQ
Sbjct: 249 MADSDNDSGGHNNS---NANSELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 305
Query: 457 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 636
ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLK+YLQ++REMEGE
Sbjct: 306 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGE 365
Query: 637 KSSMAAR--DKDPSGGVVVFEGAGSGGGG-------GG--GGGVYWQQPQPQPQQQQPQP 783
KSS+ R +KD SGG GA +GGGG GG GGG+Y
Sbjct: 366 KSSLGGRPGEKDGSGG----GGAAAGGGGAMSSGSSGGFNGGGMY-------GGMMMMGH 414
Query: 784 HQGHVYGGGGFHQMGVGIGKGGPGSNMGR 870
HQG YG G FH M GG G +GR
Sbjct: 415 HQGQAYGSGSFHHMSSSGSGGGGGGGVGR 443
>gi|147834100|emb|CAN64334.1| hypothetical protein [Vitis vinifera]
Length = 1098
Score = 248 bits (631), Expect = 9e-064
Identities = 138/205 (67%), Positives = 150/205 (73%), Gaps = 11/205 (5%)
Frame = +1
Query: 277 MADSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ 456
MADSDN SGG +N+ G SELSPREQDR LPIANVSRIMKKALPANAKISKDAKETVQ
Sbjct: 889 MADSDNXSGGHNNNAG----SELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 944
Query: 457 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 636
ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YV+PLK+YL RFREMEGE
Sbjct: 945 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKIYLHRFREMEGE 1004
Query: 637 KSSMAAR-DKD-PS---GGVVVFEGAGSGGGGGGGGGVYWQQPQPQPQQQQPQPHQGHVY 801
K+SM + +KD PS G V A +G GG G G+Y P Q HQGHVY
Sbjct: 1005 KTSMGRQGEKDGPSAAGGNGSVVNPANTGSGGFGEXGMYGAIPSTMMMMGHHQ-HQGHVY 1063
Query: 802 GGGGFHQM-GVGIGKGGPGSNMGRP 873
G +H M G G +N G P
Sbjct: 1064 GSSAYHPMAAAGANFGSGKANSGHP 1088
>gi|15238156|ref|NP_199575.1| CCAAT-box binding transcription factor subunit B
(NF-YB) (HAP3 ) (AHAP3) family (Hap3b) [Arabidopsis thaliana]
Length = 190
Score = 232 bits (590), Expect = 5e-059
Identities = 126/193 (65%), Positives = 137/193 (70%), Gaps = 10/193 (5%)
Frame = +1
Query: 277 MADSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ 456
M DSD DSGGG N +S LSPREQDR LPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1 MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60
Query: 457 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 636
ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLKVYLQRFRE+EGE
Sbjct: 61 ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120
Query: 637 KSSMAARDKDPSGGVVVFEGAGSGGG--GGGGGGVYWQQPQPQPQQQQPQPHQGHVYGG- 807
++ + G + G GGG GGGGG Y Q Q Q Q H+YG
Sbjct: 121 RTGLGRPQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQ-------QNHMYGAT 173
Query: 808 GGFHQMGVGIGKG 846
GG G G G
Sbjct: 174 GGGSDSGGGAASG 186
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
|