BLASTX 7.6.2
Query= RU05996 /QuerySize=1212
(1211 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157360845|emb|CAO70656.1| unnamed protein product [Vitis vini... 239 4e-061
gi|118484744|gb|ABK94241.1| unknown [Populus trichocarpa] 237 2e-060
gi|20385508|gb|AAM21317.1|AF373100_1 auxin-regulated protein [Po... 235 1e-059
gi|110826446|gb|ABH01143.1| auxin-regulated protein [Populus tom... 233 3e-059
gi|4887022|gb|AAD32147.1|AF123509_1 Nt-iaa4.1 deduced protein [N... 232 6e-059
>gi|157360845|emb|CAO70656.1| unnamed protein product [Vitis vinifera]
Length = 238
Score = 239 bits (609), Expect = 4e-061
Identities = 120/144 (83%), Positives = 130/144 (90%), Gaps = 6/144 (4%)
Frame = -1
Query: 761 KEYRDVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKM 582
K VQK S+++++A S+SAAFVKVSMDGAPYLRKVDLK+Y+SYQELS ALGKM
Sbjct: 101 KNILTVQKNSSEEEKA------SSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKM 154
Query: 581 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDEDWMLVGDVPWEMFVDSCKR 402
FSSFTIGNCGSQGMKDFMNESKLIDLLNGS+YVPTYEDKD DWMLVGDVPWEMFV+SCKR
Sbjct: 155 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKR 214
Query: 401 LRIMKGSEAIGLAPRAVEKFKNRS 330
LRIMKGSEAIGLAPRAVEK KNRS
Sbjct: 215 LRIMKGSEAIGLAPRAVEKCKNRS 238
>gi|118484744|gb|ABK94241.1| unknown [Populus trichocarpa]
Length = 250
Score = 237 bits (604), Expect = 2e-060
Identities = 118/144 (81%), Positives = 125/144 (86%)
Frame = -1
Query: 761 KEYRDVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKM 582
K VQK S D+ + + T+ +AAFVKVSMDGAPYLRKVDLKLY+SY+ELS ALGKM
Sbjct: 107 KNVMAVQKNSNDEGEKASSSGTTGTAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKM 166
Query: 581 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDEDWMLVGDVPWEMFVDSCKR 402
FSSFTIGNCGSQG KDFMNESKLIDLLN SEYVPTYEDKD DWMLVGDVPW MFVDSCKR
Sbjct: 167 FSSFTIGNCGSQGTKDFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKR 226
Query: 401 LRIMKGSEAIGLAPRAVEKFKNRS 330
LRIMKGSEAIGLAPRAVEK KNRS
Sbjct: 227 LRIMKGSEAIGLAPRAVEKCKNRS 250
>gi|20385508|gb|AAM21317.1|AF373100_1 auxin-regulated protein [Populus tremula x
Populus tremuloides]
Length = 249
Score = 235 bits (597), Expect = 1e-059
Identities = 119/144 (82%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = -1
Query: 761 KEYRDVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKM 582
K VQK S D+ + + + S +T AAFVKVSMDGAPYLRKVDLKLY+SY+ELS ALGKM
Sbjct: 107 KNVMAVQKNSNDEGE-KASSSGATGAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKM 165
Query: 581 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDEDWMLVGDVPWEMFVDSCKR 402
FSSFTIGNCGSQG KDFMNESKLIDLLN SEYVPTYEDKD DWMLVGDVPW MFVDSCKR
Sbjct: 166 FSSFTIGNCGSQGTKDFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKR 225
Query: 401 LRIMKGSEAIGLAPRAVEKFKNRS 330
LRIMKGSEAIGLAPRAVEK KNRS
Sbjct: 226 LRIMKGSEAIGLAPRAVEKCKNRS 249
>gi|110826446|gb|ABH01143.1| auxin-regulated protein [Populus tomentosa]
Length = 258
Score = 233 bits (593), Expect = 3e-059
Identities = 118/144 (81%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Frame = -1
Query: 761 KEYRDVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKM 582
K VQK S D+ + + + S +T AAFVKVSMDGAPYLRKVDLKLY+SY+ELS ALGKM
Sbjct: 109 KNVMAVQKNSNDEGE-KASSSGATGAAFVKVSMDGAPYLRKVDLKLYKSYRELSDALGKM 167
Query: 581 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDEDWMLVGDVPWEMFVDSCKR 402
FSSFTIGNCGSQG K+FMNESKLIDLLN SEYVPTYEDKD DWMLVGDVPW MFVDSCKR
Sbjct: 168 FSSFTIGNCGSQGTKEFMNESKLIDLLNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKR 227
Query: 401 LRIMKGSEAIGLAPRAVEKFKNRS 330
LRIMKGSEAIGLAPRAVEK KNRS
Sbjct: 228 LRIMKGSEAIGLAPRAVEKCKNRS 251
>gi|4887022|gb|AAD32147.1|AF123509_1 Nt-iaa4.1 deduced protein [Nicotiana
tabacum]
Length = 220
Score = 232 bits (590), Expect = 6e-059
Identities = 117/144 (81%), Positives = 125/144 (86%), Gaps = 5/144 (3%)
Frame = -1
Query: 761 KEYRDVQKKSTDQDQAEKTGSTSTSAAFVKVSMDGAPYLRKVDLKLYQSYQELSTALGKM 582
K VQKKST + S+S AAFVKVS+DGAPYLRKVDLK+Y+SYQ+LS ALGKM
Sbjct: 82 KNVLTVQKKSTGNGE-----SSSGGAAFVKVSVDGAPYLRKVDLKMYKSYQQLSDALGKM 136
Query: 581 FSSFTIGNCGSQGMKDFMNESKLIDLLNGSEYVPTYEDKDEDWMLVGDVPWEMFVDSCKR 402
FSSFTIGNCG+ G KDFMNESKLIDLLNGS+YVPTYEDKD DWMLVGDVPWEMFVDSCKR
Sbjct: 137 FSSFTIGNCGNHGFKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKR 196
Query: 401 LRIMKGSEAIGLAPRAVEKFKNRS 330
LRIMKGSEAIGLAPRAVEK KNRS
Sbjct: 197 LRIMKGSEAIGLAPRAVEKCKNRS 220
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
|