BLASTX 7.6.2
Query= RU06024 /QuerySize=434
(433 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|109484988|ref|XP_001056318.1| PREDICTED: hypothetical protein... 56 5e-007
>gi|109484988|ref|XP_001056318.1| PREDICTED: hypothetical protein [Rattus
norvegicus]
Length = 152
Score = 56 bits (134), Expect = 5e-007
Identities = 27/65 (41%), Positives = 50/65 (76%)
Frame = -1
Query: 223 LLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIAAVVVLVFFVVILVVLALLL 44
L++ + + VL++LVLVL+L++ V+++VLV+ L LVV+ VV+++ V++LVVL L++
Sbjct: 29 LVLVLVVLVLVVLVVLVLVLVLMVLVLVLVLVLVLLLVVLVLVVLVLMLVLVLVVLVLVV 88
Query: 43 MVLAV 29
+VL +
Sbjct: 89 LVLVL 93
Score = 56 bits (133), Expect = 6e-007
Identities = 29/64 (45%), Positives = 49/64 (76%)
Frame = -1
Query: 220 LIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIAAVVVLVFFVVILVVLALLLM 41
L+ V V VL+L+VLVL+L+L +V++VLVV + LV++ ++VLV +V+++VL L+++
Sbjct: 9 LVLVLVLVVLVLVLVVLVLVLVLVLVVLVLVVLVVLVLVLVLMVLVLVLVLVLVLLLVVL 68
Query: 40 VLAV 29
VL V
Sbjct: 69 VLVV 72
Score = 55 bits (130), Expect = 1e-006
Identities = 27/65 (41%), Positives = 50/65 (76%)
Frame = -1
Query: 223 LLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIAAVVVLVFFVVILVVLALLL 44
L++ V + ++LLLV+++L++L ++LV+++V L LVV+ V+VLV V++LVVL L+L
Sbjct: 50 LMVLVLVLVLVLVLLLVVLVLVVLVLMLVLVLVVLVLVVLVLVLVLVLVVLVLVVLVLVL 109
Query: 43 MVLAV 29
+++ V
Sbjct: 110 VLVLV 114
Score = 55 bits (130), Expect = 1e-006
Identities = 27/65 (41%), Positives = 50/65 (76%)
Frame = -1
Query: 223 LLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIAAVVVLVFFVVILVVLALLL 44
+L+ V V ++L+LVLVL++L+ VVLV+++V + +V++ V+VLV +V+++VL L++
Sbjct: 62 VLLLVVLVLVVLVLMLVLVLVVLVLVVLVLVLVLVLVVLVLVVLVLVLVLVLVLVLVLVV 121
Query: 43 MVLAV 29
+VL V
Sbjct: 122 LVLVV 126
Score = 55 bits (130), Expect = 1e-006
Identities = 28/65 (43%), Positives = 50/65 (76%)
Frame = -1
Query: 223 LLIAVAAAAVAVLLLLVLVLLLLLFVVLVVLVVALALVVIAAVVVLVFFVVILVVLALLL 44
+L+ + + VL+L+VLVL+L+L +V++VLVV + ++V+ V+VLV V++LVVL L+L
Sbjct: 72 VLVLMLVLVLVVLVLVVLVLVLVLVLVVLVLVVLVLVLVLVLVLVLVLVVLVLVVLVLVL 131
Query: 43 MVLAV 29
+++ V
Sbjct: 132 VLVLV 136
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
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