BLASTX 7.6.2
Query= RU06042 /QuerySize=994
(993 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15230708|ref|NP_187290.1| integral membrane family protein [A... 187 1e-045
gi|157336333|emb|CAO71018.1| unnamed protein product [Vitis vini... 184 1e-044
gi|18414489|ref|NP_567472.1| integral membrane family protein [A... 169 4e-040
gi|89475530|gb|ABD73297.1| unknown [Panax ginseng] 151 8e-035
gi|13265596|gb|AAG40073.2|AF324722_1 AT4g15610 [Arabidopsis thal... 147 2e-033
>gi|15230708|ref|NP_187290.1| integral membrane family protein [Arabidopsis
thaliana]
Length = 199
Score = 187 bits (474), Expect = 1e-045
Identities = 97/196 (49%), Positives = 141/196 (71%), Gaps = 11/196 (5%)
Frame = -2
Query: 923 MASTDKSANPETGKEVPPPKASYGDTPPPPPPPKAVDLFAVDVALRFLVFAASLTSVLVM 744
MAST+ + +PETGK P P ++ TPPP +D +D+ R L+F+A+LT+++VM
Sbjct: 1 MASTE-NPDPETGKSEPIPASA---TPPPSSAASFLDCRKIDIITRVLLFSATLTALIVM 56
Query: 743 VTSKQTVF------RGPIPLKAKFDHSPALIYFVVALSVAGLYGILTTLASLSVIWKPIF 582
VTS QT P P+ A+F+ SPA IYFVVAL VA Y +++TL S+S++ KP F
Sbjct: 57 VTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEF 116
Query: 581 STKFLLHVAFWDVLILGLVASATGTAGGVAYIGYKGNEHLQWNKVCSIFDKYCKHLAGSL 402
+ +F +++A D+++LG++ASATGTAGGVAYI KGNE + WNK+C+++DK+C+++A SL
Sbjct: 117 TAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICNVYDKFCRYIATSL 176
Query: 401 ATSLFAS-VLLVLLVW 357
A SLFAS +LLVL +W
Sbjct: 177 ALSLFASLLLLVLSIW 192
>gi|157336333|emb|CAO71018.1| unnamed protein product [Vitis vinifera]
Length = 148
Score = 184 bits (465), Expect = 1e-044
Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 6/148 (4%)
Frame = -2
Query: 746 MVTSKQT--VFRGPIPL----KAKFDHSPALIYFVVALSVAGLYGILTTLASLSVIWKPI 585
MVTS QT + +P+ KAKF +SPA IYFV ALSV GLY I+TTLAS I KP
Sbjct: 1 MVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAALSVVGLYSIITTLASFIFISKPS 60
Query: 584 FSTKFLLHVAFWDVLILGLVASATGTAGGVAYIGYKGNEHLQWNKVCSIFDKYCKHLAGS 405
STK +LH+A WDVL+LGL ASATGTAGGVAY+G KGN H+ WNKVC+ +DK+C+H+ GS
Sbjct: 61 CSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGNSHVGWNKVCNTYDKFCRHVGGS 120
Query: 404 LATSLFASVLLVLLVWLSTFSLHKKIPK 321
+A +LFAS+LLVLLVWLS F+L+ +I K
Sbjct: 121 IAVALFASILLVLLVWLSLFTLYSRIRK 148
>gi|18414489|ref|NP_567472.1| integral membrane family protein [Arabidopsis
thaliana]
Length = 193
Score = 169 bits (427), Expect = 4e-040
Identities = 87/162 (53%), Positives = 122/162 (75%), Gaps = 5/162 (3%)
Frame = -2
Query: 797 VALRFLVFAASLTSVLVMVTSKQT--VFRGPIPLK---AKFDHSPALIYFVVALSVAGLY 633
V LRF++FAA+LTS++VMVTSKQT +F P++ A+F +SPALIYFVVALSVA Y
Sbjct: 31 VVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVACFY 90
Query: 632 GILTTLASLSVIWKPIFSTKFLLHVAFWDVLILGLVASATGTAGGVAYIGYKGNEHLQWN 453
I++T ++S K S LL++A D +++G+VASATG GGVAY+G KGN+ ++W
Sbjct: 91 SIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWG 150
Query: 452 KVCSIFDKYCKHLAGSLATSLFASVLLVLLVWLSTFSLHKKI 327
K+C I+DK+C+H+ G++A SLFASV+L+LL +S SL+KKI
Sbjct: 151 KICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKI 192
>gi|89475530|gb|ABD73297.1| unknown [Panax ginseng]
Length = 148
Score = 151 bits (381), Expect = 8e-035
Identities = 77/148 (52%), Positives = 101/148 (68%), Gaps = 6/148 (4%)
Frame = -2
Query: 746 MVTSKQTVF------RGPIPLKAKFDHSPALIYFVVALSVAGLYGILTTLASLSVIWKPI 585
MVT KQT IP +KF SPA IYFV A SVAGLY I+T+L S + KP
Sbjct: 1 MVTGKQTELIPIPFPPYQIPYSSKFTDSPAFIYFVAAFSVAGLYSIITSLLSGLALLKPG 60
Query: 584 FSTKFLLHVAFWDVLILGLVASATGTAGGVAYIGYKGNEHLQWNKVCSIFDKYCKHLAGS 405
++ + + H DVL+LG+VA+A G AGGV YIG +GN H +W K+C+I+D +C+HLAGS
Sbjct: 61 YAKQLVSHFVVVDVLLLGIVAAAIGAAGGVGYIGLRGNSHSRWTKICNIYDTFCQHLAGS 120
Query: 404 LATSLFASVLLVLLVWLSTFSLHKKIPK 321
+A L AS++LVLL+ LS F+L +KIPK
Sbjct: 121 IAAGLIASIVLVLLILLSFFTLSRKIPK 148
>gi|13265596|gb|AAG40073.2|AF324722_1 AT4g15610 [Arabidopsis thaliana]
Length = 146
Score = 147 bits (370), Expect = 2e-033
Identities = 76/145 (52%), Positives = 106/145 (73%), Gaps = 5/145 (3%)
Frame = -2
Query: 746 MVTSKQT--VFRGPIPLK---AKFDHSPALIYFVVALSVAGLYGILTTLASLSVIWKPIF 582
MVTSKQT +F P++ A+F +SPALIYFVVALSVA Y I++T ++S K
Sbjct: 1 MVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVACFYSIVSTFVTVSAFKKHSC 60
Query: 581 STKFLLHVAFWDVLILGLVASATGTAGGVAYIGYKGNEHLQWNKVCSIFDKYCKHLAGSL 402
S LL++A D +++G+VASATG GGVAY+G KGN+ ++W K+C I+DK+C+H+ G++
Sbjct: 61 SAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAI 120
Query: 401 ATSLFASVLLVLLVWLSTFSLHKKI 327
A SLFASV+L+LL +S SL+KKI
Sbjct: 121 AVSLFASVVLLLLSIISVLSLYKKI 145
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
|