BLASTX 7.6.2
Query= RU06088 /QuerySize=492
(491 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|47497035|dbj|BAD19088.1| putative 60S ribosomal protein L39 [... 107 5e-022
gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia ... 106 6e-022
gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) ... 106 8e-022
gi|118484124|gb|ABK93945.1| unknown [Populus trichocarpa] 105 2e-021
gi|115449229|ref|NP_001048394.1| Os02g0797200 [Oryza sativa (jap... 102 9e-021
>gi|47497035|dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa
Japonica Group]
Length = 118
Score = 107 bits (265), Expect = 5e-022
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2
Query: 38 LPTAKMPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
+P A MPSHKTF IKKKL KKMRQNRPIP+WIRMRTDNTIR NAKRRHWRRTKLGF
Sbjct: 63 VPAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118
>gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii]
Length = 51
Score = 106 bits (264), Expect = 6e-022
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = +2
Query: 53 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSHKTF+IKKKL KKMRQNRPIPHWIRMRTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) [Arabidopsis
thaliana]
Length = 51
Score = 106 bits (263), Expect = 8e-022
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +2
Query: 53 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSHK+F+IKKKLGKKMRQNRPIPHWIR+RTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
>gi|118484124|gb|ABK93945.1| unknown [Populus trichocarpa]
Length = 51
Score = 105 bits (260), Expect = 2e-021
Identities = 48/51 (94%)
Frame = +2
Query: 53 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSHKTF IKKKL KKMRQNRPIPHWIRMRTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gi|115449229|ref|NP_001048394.1| Os02g0797200 [Oryza sativa (japonica
cultivar-group)]
Length = 51
Score = 102 bits (254), Expect = 9e-021
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +2
Query: 53 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSHKTF IKKKL KKMRQNRPIP+WIRMRTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,691,905,965
Number of Sequences: 7387702
Number of Extensions: 182691905965
Number of Successful Extensions: 98329402
Number of sequences better than 0.0: 0
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