BLASTX 7.6.2
Query= RU06142 /QuerySize=447
(446 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|68532885|dbj|BAE06067.1| expansin [Sagittaria pygmaea] 179 5e-044
gi|56269870|gb|AAV85475.1| expansin [Populus tomentosa] 176 5e-043
gi|118483277|gb|ABK93541.1| unknown [Populus trichocarpa] 176 5e-043
gi|115334948|gb|ABI94060.1| ripening-related expansin [Cucumis m... 175 7e-043
gi|21314549|gb|AAM47000.1|AF512542_1 alpha-expansin precursor [G... 174 1e-042
>gi|68532885|dbj|BAE06067.1| expansin [Sagittaria pygmaea]
Length = 266
Score = 179 bits (453), Expect = 5e-044
Identities = 82/95 (86%), Positives = 89/95 (93%)
Frame = +2
Query: 59 GIRFTINGHKYFNLVLITNVAGAGDVVSVSVKGTNTGWMPMSRNWGQNWQSNSVLVGQAL 238
GIRFTINGH+YFNLVLITNVAGAGD+V VSVKGT TGWMPMSRNWGQNWQSN+VLVGQAL
Sbjct: 172 GIRFTINGHRYFNLVLITNVAGAGDIVRVSVKGTKTGWMPMSRNWGQNWQSNAVLVGQAL 231
Query: 239 SFRVRGSDRRSSTTYNVAPANWQFGQTYSGKNFRV 343
SFRV GSD R+ST++NV PANW FGQT+SGKNFRV
Sbjct: 232 SFRVTGSDHRTSTSWNVVPANWNFGQTFSGKNFRV 266
>gi|56269870|gb|AAV85475.1| expansin [Populus tomentosa]
Length = 258
Score = 176 bits (444), Expect = 5e-043
Identities = 83/102 (81%), Positives = 92/102 (90%), Gaps = 1/102 (0%)
Frame = +2
Query: 38 PTAERGEGIRFTINGHKYFNLVLITNVAGAGDVVSVSVKGTNTGWMPMSRNWGQNWQSNS 217
P E G GIRFTINGH+YFNLVLITNVAGAGD+V VSVKG+ TGWM MSRNWGQNWQSNS
Sbjct: 158 PCREPG-GIRFTINGHRYFNLVLITNVAGAGDLVKVSVKGSRTGWMSMSRNWGQNWQSNS 216
Query: 218 VLVGQALSFRVRGSDRRSSTTYNVAPANWQFGQTYSGKNFRV 343
VLVGQ+LSFRV GSDRR+ST++NV P NWQFGQT++GKNFRV
Sbjct: 217 VLVGQSLSFRVTGSDRRTSTSWNVVPPNWQFGQTFAGKNFRV 258
>gi|118483277|gb|ABK93541.1| unknown [Populus trichocarpa]
Length = 258
Score = 176 bits (444), Expect = 5e-043
Identities = 80/95 (84%), Positives = 89/95 (93%)
Frame = +2
Query: 59 GIRFTINGHKYFNLVLITNVAGAGDVVSVSVKGTNTGWMPMSRNWGQNWQSNSVLVGQAL 238
GIRFTINGH+YFNLVLITNVAGAGD+V VSVKG TGWM MSRNWGQNWQSNSVLVGQ+L
Sbjct: 164 GIRFTINGHRYFNLVLITNVAGAGDIVKVSVKGCRTGWMSMSRNWGQNWQSNSVLVGQSL 223
Query: 239 SFRVRGSDRRSSTTYNVAPANWQFGQTYSGKNFRV 343
SFRV GSDRR+ST++NV P+NWQFGQT++GKNFRV
Sbjct: 224 SFRVTGSDRRTSTSWNVVPSNWQFGQTFAGKNFRV 258
>gi|115334948|gb|ABI94060.1| ripening-related expansin [Cucumis melo]
Length = 259
Score = 175 bits (443), Expect = 7e-043
Identities = 82/102 (80%), Positives = 94/102 (92%), Gaps = 1/102 (0%)
Frame = +2
Query: 38 PTAERGEGIRFTINGHKYFNLVLITNVAGAGDVVSVSVKGTNTGWMPMSRNWGQNWQSNS 217
P ++G GIRFTING +YFNLVLITNVAGAGD+V VSVKG+NTGWM MSRNWGQNWQSN+
Sbjct: 159 PCRKQG-GIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGSNTGWMSMSRNWGQNWQSNA 217
Query: 218 VLVGQALSFRVRGSDRRSSTTYNVAPANWQFGQTYSGKNFRV 343
VLVGQ LSFRV GSDRR+ST++NVAP+NWQFGQT++GKNFRV
Sbjct: 218 VLVGQTLSFRVTGSDRRTSTSWNVAPSNWQFGQTFTGKNFRV 259
>gi|21314549|gb|AAM47000.1|AF512542_1 alpha-expansin precursor [Gossypium
hirsutum]
Length = 264
Score = 174 bits (441), Expect = 1e-042
Identities = 82/102 (80%), Positives = 92/102 (90%), Gaps = 1/102 (0%)
Frame = +2
Query: 38 PTAERGEGIRFTINGHKYFNLVLITNVAGAGDVVSVSVKGTNTGWMPMSRNWGQNWQSNS 217
P ++G GIRFTING +YFNLVL+TNVAGAGD+V V VKGTNT WM MSRNWGQNWQSN+
Sbjct: 164 PCRKQG-GIRFTINGFRYFNLVLVTNVAGAGDIVKVKVKGTNTNWMSMSRNWGQNWQSNA 222
Query: 218 VLVGQALSFRVRGSDRRSSTTYNVAPANWQFGQTYSGKNFRV 343
VLVGQALSFRV GSDRR+ST+ NVAPANWQFGQT++GKNFRV
Sbjct: 223 VLVGQALSFRVTGSDRRTSTSLNVAPANWQFGQTFTGKNFRV 264
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,680,618,691
Number of Sequences: 7387702
Number of Extensions: 189680618691
Number of Successful Extensions: 106160893
Number of sequences better than 0.0: 0
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