BLASTX 7.6.2
Query= RU06233 /QuerySize=897
(896 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|205326619|gb|ACI03399.1| beta-tubulin [Prunus salicina var. c... 372 3e-101
gi|153799895|gb|ABS50666.1| beta-tubulin [Eucalyptus grandis] 361 4e-098
gi|166343845|gb|ABY86665.1| beta-tubulin 19 [Gossypium hirsutum] 360 1e-097
gi|166343843|gb|ABY86664.1| beta-tubulin 18 [Gossypium hirsutum] 358 5e-097
gi|267075|sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chai... 354 9e-096
>gi|205326619|gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]
Length = 446
Score = 372 bits (954), Expect = 3e-101
Identities = 180/181 (99%), Positives = 181/181 (100%)
Frame = -3
Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325
Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEEE 346
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADE+EYEDEQGEYEEE
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEYEDEQGEYEEE 445
Query: 345 M 343
M
Sbjct: 446 M 446
>gi|153799895|gb|ABS50666.1| beta-tubulin [Eucalyptus grandis]
Length = 447
Score = 361 bits (926), Expect = 4e-098
Identities = 172/180 (95%), Positives = 180/180 (100%)
Frame = -3
Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325
Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
VD+QM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEEE 346
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD++EYE+E+G+Y+EE
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDEEYEEEEGDYQEE 445
>gi|166343845|gb|ABY86665.1| beta-tubulin 19 [Gossypium hirsutum]
Length = 444
Score = 360 bits (922), Expect = 1e-097
Identities = 172/179 (96%), Positives = 178/179 (99%)
Frame = -3
Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
FMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 325
Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
VD+QM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEE 349
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYE+E+ EYE+
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEEEEAEYED 444
>gi|166343843|gb|ABY86664.1| beta-tubulin 18 [Gossypium hirsutum]
Length = 444
Score = 358 bits (917), Expect = 5e-097
Identities = 171/179 (95%), Positives = 177/179 (98%)
Frame = -3
Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
FMVGFAPLT RGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTPRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 325
Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
VD+QM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385
Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEE 349
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYE+E+ EYE+
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEEEEAEYED 444
>gi|267075|sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chain; AltName:
Full=Beta-2-tubulin
Length = 447
Score = 354 bits (906), Expect = 9e-096
Identities = 168/180 (93%), Positives = 178/180 (98%)
Frame = -3
Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
FM+GFAPLTSRGSQQYRAL+VPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRGKMSTKE
Sbjct: 264 FMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKE 323
Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
VD+QMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 324 VDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 383
Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEEE 346
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+EDEYE+E+ +Y +E
Sbjct: 384 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEDEYEEEEEDYHQE 443
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,577,861,522
Number of Sequences: 7387702
Number of Extensions: 196577861522
Number of Successful Extensions: 112890442
Number of sequences better than 0.0: 0
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