Blast details for RU06233 (GenBank)


BLASTX 7.6.2

Query= RU06233 /QuerySize=897
        (896 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|205326619|gb|ACI03399.1| beta-tubulin [Prunus salicina var. c...    372   3e-101
gi|153799895|gb|ABS50666.1| beta-tubulin [Eucalyptus grandis]          361   4e-098
gi|166343845|gb|ABY86665.1| beta-tubulin 19 [Gossypium hirsutum]       360   1e-097
gi|166343843|gb|ABY86664.1| beta-tubulin 18 [Gossypium hirsutum]       358   5e-097
gi|267075|sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chai...    354   9e-096

>gi|205326619|gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]

          Length = 446

 Score =  372 bits (954), Expect = 3e-101
 Identities = 180/181 (99%), Positives = 181/181 (100%)
 Frame = -3

Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
           FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325

Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
           VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385

Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEEE 346
           TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADE+EYEDEQGEYEEE
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEEYEDEQGEYEEE 445

Query: 345 M 343
           M
Sbjct: 446 M 446

>gi|153799895|gb|ABS50666.1| beta-tubulin [Eucalyptus grandis]

          Length = 447

 Score =  361 bits (926), Expect = 4e-098
 Identities = 172/180 (95%), Positives = 180/180 (100%)
 Frame = -3

Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
           FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 325

Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
           VD+QM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385

Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEEE 346
           TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD++EYE+E+G+Y+EE
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADDEEYEEEEGDYQEE 445

>gi|166343845|gb|ABY86665.1| beta-tubulin 19 [Gossypium hirsutum]

          Length = 444

 Score =  360 bits (922), Expect = 1e-097
 Identities = 172/179 (96%), Positives = 178/179 (99%)
 Frame = -3

Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
           FMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 325

Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
           VD+QM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385

Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEE 349
           TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYE+E+ EYE+
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEEEEAEYED 444

>gi|166343843|gb|ABY86664.1| beta-tubulin 18 [Gossypium hirsutum]

          Length = 444

 Score =  358 bits (917), Expect = 5e-097
 Identities = 171/179 (95%), Positives = 177/179 (98%)
 Frame = -3

Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
           FMVGFAPLT RGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRYLTASAMFRGKMSTKE
Sbjct: 266 FMVGFAPLTPRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 325

Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
           VD+QM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 326 VDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 385

Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEE 349
           TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYE+E+ EYE+
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEEEEAEYED 444

>gi|267075|sp|P29501.1|TBB2_PEA RecName: Full=Tubulin beta-2 chain; AltName:
        Full=Beta-2-tubulin

          Length = 447

 Score =  354 bits (906), Expect = 9e-096
 Identities = 168/180 (93%), Positives = 178/180 (98%)
 Frame = -3

Query: 885 FMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKE 706
           FM+GFAPLTSRGSQQYRAL+VPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRGKMSTKE
Sbjct: 264 FMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKE 323

Query: 705 VDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 526
           VD+QMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF
Sbjct: 324 VDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQF 383

Query: 525 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEDEYEDEQGEYEEE 346
           TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+EDEYE+E+ +Y +E
Sbjct: 384 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEDEYEEEEEDYHQE 443

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,577,861,522
Number of Sequences: 7387702
Number of Extensions: 196577861522
Number of Successful Extensions: 112890442
Number of sequences better than 0.0: 0