BLASTX 7.6.2
Query= RU06249 /QuerySize=1736
(1735 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15029368|gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa... 624 9e-177
gi|157328261|emb|CAO17739.1| unnamed protein product [Vitis vini... 620 1e-175
gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menziesi... 619 4e-175
gi|6723478|emb|CAB66336.1| alpha-tubulin [Betula pendula] 617 9e-175
gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus tremuloides] 617 1e-174
>gi|15029368|gb|AAK81858.1|AF394915_1 alpha tubulin subunit [Rosa hybrid
cultivar]
Length = 451
Score = 624 bits (1608), Expect = 9e-177
Identities = 309/309 (100%)
Frame = +3
Query: 513 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV 692
GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV 202
Query: 693 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 872
LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 262
Query: 873 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 1052
PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 1053 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 1232
VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST
Sbjct: 323 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 1233 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 1412
SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 442
Query: 1413 DDGDEGDEY 1439
DDGDEGDEY
Sbjct: 443 DDGDEGDEY 451
>gi|157328261|emb|CAO17739.1| unnamed protein product [Vitis vinifera]
Length = 451
Score = 620 bits (1598), Expect = 1e-175
Identities = 306/309 (99%), Positives = 309/309 (100%)
Frame = +3
Query: 513 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV 692
GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+V
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAV 202
Query: 693 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 872
LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 262
Query: 873 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 1052
PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 1053 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 1232
VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST
Sbjct: 323 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 1233 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 1412
SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 442
Query: 1413 DDGDEGDEY 1439
+DGDEGDEY
Sbjct: 443 EDGDEGDEY 451
>gi|56481443|gb|AAV92352.1| alpha tubulin 1 [Pseudotsuga menziesii var.
menziesii]
Length = 451
Score = 619 bits (1594), Expect = 4e-175
Identities = 305/309 (98%), Positives = 309/309 (100%)
Frame = +3
Query: 513 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV 692
GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+V
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAV 202
Query: 693 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 872
LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 262
Query: 873 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 1052
PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 1053 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 1232
VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST
Sbjct: 323 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 1233 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 1412
SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 442
Query: 1413 DDGDEGDEY 1439
++GDEGDEY
Sbjct: 443 EEGDEGDEY 451
>gi|6723478|emb|CAB66336.1| alpha-tubulin [Betula pendula]
Length = 451
Score = 617 bits (1591), Expect = 9e-175
Identities = 305/309 (98%), Positives = 309/309 (100%)
Frame = +3
Query: 513 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV 692
GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+V
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAV 202
Query: 693 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 872
LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 262
Query: 873 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 1052
PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 1053 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 1232
VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST
Sbjct: 323 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 1233 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 1412
SVAEVFSRID+KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG
Sbjct: 383 SVAEVFSRIDNKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 442
Query: 1413 DDGDEGDEY 1439
+DGDEGDEY
Sbjct: 443 EDGDEGDEY 451
>gi|29124983|gb|AAO63781.1| alpha-tubulin 1 [Populus tremuloides]
Length = 451
Score = 617 bits (1590), Expect = 1e-174
Identities = 304/309 (98%), Positives = 308/309 (99%)
Frame = +3
Query: 513 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSV 692
GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+V
Sbjct: 143 GGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAV 202
Query: 693 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 872
LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY
Sbjct: 203 LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPY 262
Query: 873 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 1052
PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEP+SMMAKCDPRHGKYMACCLMYRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 1053 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 1232
VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST
Sbjct: 323 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 1233 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEG 1412
SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES +G
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESPDG 442
Query: 1413 DDGDEGDEY 1439
+DGDEGDEY
Sbjct: 443 EDGDEGDEY 451
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,577,861,522
Number of Sequences: 7387702
Number of Extensions: 196577861522
Number of Successful Extensions: 112890442
Number of sequences better than 0.0: 0
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