BLASTX 7.6.2
Query= RU06276 /QuerySize=1034
(1033 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|559557|gb|AAA51649.1| arabinogalactan-protein 136 5e-030
gi|30140331|emb|CAD89603.1| putative arabinagalactan protein [Lo... 109 7e-022
gi|195612216|gb|ACG27938.1| unknown [Zea mays] 82 9e-014
gi|212727030|gb|ACJ38405.1| platelet glycoprotein Ib alpha polyp... 75 1e-011
gi|121308607|dbj|BAF43699.1| PERK1-like protein kinase [Nicotian... 71 1e-010
>gi|559557|gb|AAA51649.1| arabinogalactan-protein
Length = 145
Score = 136 bits (340), Expect = 5e-030
Identities = 76/145 (52%), Positives = 95/145 (65%), Gaps = 7/145 (4%)
Frame = +2
Query: 257 KMGFARIQVFVILGLLATSCLAQSPAAAPKLAPTAA--PTTSPPAATP---APAPTTAAP 421
KMGFA QV ++LGLLATSC+AQ+P AAP +P A PT +PP ATP P P+ +
Sbjct: 2 KMGFAGFQVLMVLGLLATSCIAQAPGAAPTASPPTAKSPTATPPTATPPSAVPVPSPSKT 61
Query: 422 APSATTPSPASSATPPASSPSTTPASTPESSTPTSSPPSPTAGEPTSGPAGEPAAEV-PS 598
++ TPSP ++ TP AS PS+TPASTP +STP + PS +A S P PA + PS
Sbjct: 62 PTASPTPSPVTAPTPSASPPSSTPASTP-ASTPAAKSPSSSAAPSGSSPNSPPADAIPPS 120
Query: 599 GASAPRWAAVAGTALVGSFFAVVLA 673
G SA A+AGTAL G FFA+VLA
Sbjct: 121 GTSAISRVAIAGTALAGVFFAIVLA 145
>gi|30140331|emb|CAD89603.1| putative arabinagalactan protein [Lotus japonicus]
Length = 149
Score = 109 bits (270), Expect = 7e-022
Identities = 62/124 (50%), Positives = 76/124 (61%), Gaps = 10/124 (8%)
Frame = +2
Query: 260 MGFARIQVFVILGLLATSCLAQSPAAAPKLAPTAAPTTSPPAATPAPAPTT----AAPAP 427
MG +++F+ILGLLATSC+AQ+P AAP APT P PPAA PAP P T A PAP
Sbjct: 1 MGSIAVKLFLILGLLATSCVAQAPGAAPTQAPTTTP-PPPPAAAPAPPPATPPPAATPAP 59
Query: 428 SATTP--SPASSATPPASSPSTTPASTPESSTPTSSPPSPTAGEPTSGPAGEPAAEVPSG 601
+ T P +PA SA+PPA +P+ +P P S SSPP+P P SGP G A P+
Sbjct: 60 TTTPPAATPAPSASPPAPTPTASPTGAPTPS--ASSPPAPIPSGPASGP-GPAAGPGPNS 116
Query: 602 ASAP 613
A P
Sbjct: 117 ADTP 120
>gi|195612216|gb|ACG27938.1| unknown [Zea mays]
Length = 231
Score = 82 bits (200), Expect = 9e-014
Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +2
Query: 287 VILGLLATSCLA-QSPAAAPKLAPTAAPTTSPPAATPAPAPTTAAPAPSATTPSPASSAT 463
++L LL SC A QSP A P A P SPP A PA P A AP A P PA +AT
Sbjct: 8 LVLVLLIASCAAQQSPPAQAPPTPNAPPANSPPQAPPAGNPPPAPQAPPAGNPPPAPTAT 67
Query: 464 PPASSPSTTPASTPESSTPTSSPPSPTA--GEPTSGPAGEPAAEVPSGASAP 613
PP + + PA T PT+ PP+PT PT+ P PA+ P+ + P
Sbjct: 68 PPPAPTTPPPAPTTPPLAPTTPPPAPTTPPPAPTTPPPSPPASPPPAPTTPP 119
>gi|212727030|gb|ACJ38405.1| platelet glycoprotein Ib alpha polypeptide [Macaca
mulatta]
Length = 755
Score = 75 bits (182), Expect = 1e-011
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +2
Query: 353 PTAAPTTSPPAATPAPAPTTAAPAPSATTPSPASSATPPASSPS-TTPASTPESSTPTSS 529
P PT SP P P+PTT P PS TTP P S T S+PS TP TP S T +
Sbjct: 400 PAPEPTPSPTTPEPTPSPTTQEPTPSPTTPEPTPSPTTQESTPSPITPEPTP-SQTTSEP 458
Query: 530 PPSPTAGEPTSGPAGEPAAEVPSGASAP 613
PSPT EPT PA P P+ AP
Sbjct: 459 TPSPTTQEPTPEPAPSPTTPEPTPEPAP 486
>gi|121308607|dbj|BAF43699.1| PERK1-like protein kinase [Nicotiana tabacum]
Length = 665
Score = 71 bits (173), Expect = 1e-010
Identities = 36/92 (39%), Positives = 47/92 (51%)
Frame = +2
Query: 326 SPAAAPKLAPTAAPTTSPPAATPAPAPTTAAPAPSATTPSPASSATPPASSPSTTPASTP 505
SP +P A P +PP +P P TT P SA+ P P++SA ++ P T STP
Sbjct: 24 SPPPTAVASPPALPAQAPPPTSPTPPATTPPPTASASPPPPSTSAPSSSTPPPPTTQSTP 83
Query: 506 ESSTPTSSPPSPTAGEPTSGPAGEPAAEVPSG 601
E S SPPSP +G S PA + P+G
Sbjct: 84 EPSGSPPSPPSPPSGSSPSPPAPSGSGRSPAG 115
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,577,861,522
Number of Sequences: 7387702
Number of Extensions: 196577861522
Number of Successful Extensions: 112890442
Number of sequences better than 0.0: 0
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