BLASTX 7.6.2
Query= RU06379 /QuerySize=1054
(1053 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|205326619|gb|ACI03399.1| beta-tubulin [Prunus salicina var. c... 532 2e-149
gi|194702760|gb|ACF85464.1| unknown [Zea mays] 531 5e-149
gi|157337188|emb|CAO21534.1| unnamed protein product [Vitis vini... 529 2e-148
gi|18424620|ref|NP_568959.1| TUB2 (Tubulin beta-2); structural m... 528 5e-148
gi|13605867|gb|AAK32919.1|AF367332_1 AT5g62700/MRG21_12 [Arabido... 528 5e-148
>gi|205326619|gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]
Length = 446
Score = 532 bits (1370), Expect = 2e-149
Identities = 259/266 (97%), Positives = 260/266 (97%)
Frame = +2
Query: 92 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSELQLERVNVYYNEASGGRYV 271
MREILHIQGGQCGNQIGAKFWEVVCAEHGID TGRY GDSELQLERVNVYYNEASGGRYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSELQLERVNVYYNEASGGRYV 60
Query: 272 PRAVLMDLEPGTMDSVRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 451
PRAVLMDLEPGTMDS+RSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSFKVSDTVV 631
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS KVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 632 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 811
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 812 RFPGQLNSDLRKLAVNLIPFPRLLLF 889
RFPGQLNSDLRKLAVNLIPFPRL F
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFF 266
>gi|194702760|gb|ACF85464.1| unknown [Zea mays]
Length = 496
Score = 531 bits (1366), Expect = 5e-149
Identities = 259/275 (94%), Positives = 264/275 (96%)
Frame = +2
Query: 65 FRSLSLSTKMREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSELQLERVNVYY 244
F S S KMREILHIQGGQCGNQIGAKFWEVVC EHGIDPTGRYTG+S+LQLERVNVYY
Sbjct: 42 FGSSHTSAKMREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYY 101
Query: 245 NEASGGRYVPRAVLMDLEPGTMDSVRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 424
NEAS GR+VPRAVLMDLEPGTMDSVR+G YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 102 NEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 161
Query: 425 LIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 604
LIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFP
Sbjct: 162 LIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 221
Query: 605 SFKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISA 784
S KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISA
Sbjct: 222 SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISA 281
Query: 785 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLLLF 889
TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL F
Sbjct: 282 TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFF 316
>gi|157337188|emb|CAO21534.1| unnamed protein product [Vitis vinifera]
Length = 446
Score = 529 bits (1361), Expect = 2e-148
Identities = 255/266 (95%), Positives = 259/266 (97%)
Frame = +2
Query: 92 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSELQLERVNVYYNEASGGRYV 271
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTG+Y GDSE+QLER+NVYYNEA GGR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGKYHGDSEIQLERINVYYNEAGGGRFV 60
Query: 272 PRAVLMDLEPGTMDSVRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 451
PRAVLMDLEPG MDSVRSG YGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGVMDSVRSGQYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSFKVSDTVV 631
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS KVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 632 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 811
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 812 RFPGQLNSDLRKLAVNLIPFPRLLLF 889
RFPGQLNSDLRKLAVNLIPFPRL F
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFF 266
>gi|18424620|ref|NP_568959.1| TUB2 (Tubulin beta-2); structural molecule
[Arabidopsis thaliana]
Length = 450
Score = 528 bits (1358), Expect = 5e-148
Identities = 255/266 (95%), Positives = 260/266 (97%)
Frame = +2
Query: 92 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSELQLERVNVYYNEASGGRYV 271
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDS+LQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 272 PRAVLMDLEPGTMDSVRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 451
PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSFKVSDTVV 631
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPS KVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 632 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 811
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 812 RFPGQLNSDLRKLAVNLIPFPRLLLF 889
RFPGQLNSDLRKLAVNLIPFPRL F
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFF 266
>gi|13605867|gb|AAK32919.1|AF367332_1 AT5g62700/MRG21_12 [Arabidopsis thaliana]
Length = 353
Score = 528 bits (1358), Expect = 5e-148
Identities = 255/266 (95%), Positives = 260/266 (97%)
Frame = +2
Query: 92 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSELQLERVNVYYNEASGGRYV 271
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDS+LQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 272 PRAVLMDLEPGTMDSVRSGLYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 451
PRAVLMDLEPGTMDS+RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 452 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSFKVSDTVV 631
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPS KVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 632 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 811
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 812 RFPGQLNSDLRKLAVNLIPFPRLLLF 889
RFPGQLNSDLRKLAVNLIPFPRL F
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFF 266
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,507,433,854
Number of Sequences: 7387702
Number of Extensions: 203507433854
Number of Successful Extensions: 120256368
Number of sequences better than 0.0: 0
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