BLASTX 7.6.2
Query= RU06388 /QuerySize=798
(797 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|6094048|sp|O49884|RL30_LUPLU 60S ribosomal protein L30 218 6e-055
gi|157345068|emb|CAO71796.1| unnamed protein product [Vitis vini... 217 1e-054
gi|156530455|gb|ABU75308.1| ribosomal protein L30e [Pisum sativum] 215 3e-054
gi|118483895|gb|ABK93838.1| unknown [Populus trichocarpa] 215 5e-054
gi|118481493|gb|ABK92689.1| unknown [Populus trichocarpa] 215 5e-054
>gi|6094048|sp|O49884|RL30_LUPLU 60S ribosomal protein L30
Length = 112
Score = 218 bits (553), Expect = 6e-055
Identities = 104/112 (92%), Positives = 109/112 (97%)
Frame = +2
Query: 278 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 457
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ +LRSSKGKLIII+NNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
Query: 458 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDQ 613
EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGDSDIIKTLPGDQ
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGDQ 112
>gi|157345068|emb|CAO71796.1| unnamed protein product [Vitis vinifera]
Length = 112
Score = 217 bits (551), Expect = 1e-054
Identities = 105/111 (94%), Positives = 109/111 (98%)
Frame = +2
Query: 278 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 457
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ +LRSSKGKLI+ISNNCPPLRKSEI
Sbjct: 1 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEI 60
Query: 458 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 610
EYYAMLAKVGVHH+NGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD
Sbjct: 61 EYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 111
>gi|156530455|gb|ABU75308.1| ribosomal protein L30e [Pisum sativum]
Length = 112
Score = 215 bits (547), Expect = 3e-054
Identities = 102/112 (91%), Positives = 109/112 (97%)
Frame = +2
Query: 278 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 457
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ +LRSSKGKLIII+NNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
Query: 458 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGDQ 613
EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGDSDIIK++PGDQ
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 112
>gi|118483895|gb|ABK93838.1| unknown [Populus trichocarpa]
Length = 112
Score = 215 bits (545), Expect = 5e-054
Identities = 103/111 (92%), Positives = 108/111 (97%)
Frame = +2
Query: 278 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 457
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ +LR+SKGKLIIISNNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEI 60
Query: 458 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 610
EYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSIIDPGDSDIIK++PGD
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGD 111
>gi|118481493|gb|ABK92689.1| unknown [Populus trichocarpa]
Length = 112
Score = 215 bits (545), Expect = 5e-054
Identities = 103/111 (92%), Positives = 107/111 (96%)
Frame = +2
Query: 278 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 457
MV KKTKKTHESINNRLALVMKSGKYTLGYKTV+ TLRSSKGKLI++SNNCPPLRKSEI
Sbjct: 1 MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLILLSNNCPPLRKSEI 60
Query: 458 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 610
EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIID GDSDIIKT+PGD
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDAGDSDIIKTVPGD 111
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,507,433,854
Number of Sequences: 7387702
Number of Extensions: 203507433854
Number of Successful Extensions: 120256368
Number of sequences better than 0.0: 0
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