BLASTX 7.6.2
Query= RU06416 /QuerySize=748
(747 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118485435|gb|ABK94574.1| unknown [Populus trichocarpa] 270 1e-070
gi|147769777|emb|CAN63391.1| hypothetical protein [Vitis vinifera] 267 8e-070
gi|62286683|sp|Q9M531|H2A_EUPES Histone H2A 265 3e-069
gi|47026912|gb|AAT08677.1| histone H2A [Hyacinthus orientalis] 257 7e-067
gi|47026919|gb|AAT08680.1| histone H2A [Hyacinthus orientalis] 257 1e-066
>gi|118485435|gb|ABK94574.1| unknown [Populus trichocarpa]
Length = 149
Score = 270 bits (688), Expect = 1e-070
Identities = 138/149 (92%), Positives = 141/149 (94%), Gaps = 1/149 (0%)
Frame = +2
Query: 56 METGGKFKKGAGGRKAGGPKKKPVTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPVYL 235
METGGK KKGA GRK GGPKKKPV+RS KAGLQFPVGRIGRYLK GRY+QRVGSGAPVYL
Sbjct: 1 METGGKVKKGAAGRKGGGPKKKPVSRSAKAGLQFPVGRIGRYLKKGRYSQRVGSGAPVYL 60
Query: 236 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 415
AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
Query: 416 NPVLLPKNSGKTAAKEPKSPSKATKSPKK 502
NPVLLPK + K AAKEPKSPSKATKSPKK
Sbjct: 121 NPVLLPKKTEK-AAKEPKSPSKATKSPKK 148
>gi|147769777|emb|CAN63391.1| hypothetical protein [Vitis vinifera]
Length = 149
Score = 267 bits (681), Expect = 8e-070
Identities = 136/149 (91%), Positives = 140/149 (93%), Gaps = 1/149 (0%)
Frame = +2
Query: 56 METGGKFKKGAGGRKAGGPKKKPVTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPVYL 235
ME GK KKGAGGRK GGPKKKPV+RS KAGLQFPVGRIGRYLK GRY+QRVG+GAPVYL
Sbjct: 1 MEAAGKVKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60
Query: 236 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 415
AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
Query: 416 NPVLLPKNSGKTAAKEPKSPSKATKSPKK 502
NPVLLPK S K AAKEPKSPSKATKSP+K
Sbjct: 121 NPVLLPKKSDK-AAKEPKSPSKATKSPRK 148
>gi|62286683|sp|Q9M531|H2A_EUPES Histone H2A
Length = 153
Score = 265 bits (676), Expect = 3e-069
Identities = 136/153 (88%), Positives = 141/153 (92%), Gaps = 3/153 (1%)
Frame = +2
Query: 56 METGGKFKKGAGGRKAGGPKKKPVTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPVYL 235
M+TG K KKGAG RK GGPKKKPV+RS KAGLQFPVGRIGR+LK GRYAQRVGSGAPVYL
Sbjct: 1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60
Query: 236 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 415
AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
Query: 416 NPVLLPKNSGKTAA---KEPKSPSKATKSPKKA 505
NPVLLPK + K AA KEPKSP+KATKSPKKA
Sbjct: 121 NPVLLPKKAEKAAAAATKEPKSPAKATKSPKKA 153
>gi|47026912|gb|AAT08677.1| histone H2A [Hyacinthus orientalis]
Length = 152
Score = 257 bits (656), Expect = 7e-067
Identities = 129/151 (85%), Positives = 137/151 (90%)
Frame = +2
Query: 56 METGGKFKKGAGGRKAGGPKKKPVTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPVYL 235
METGGK KKGAGGRK GGP+KK V+RS KAGLQFPVGR+GRYLK GRYAQRVG+GAPVYL
Sbjct: 1 METGGKMKKGAGGRKGGGPRKKSVSRSVKAGLQFPVGRLGRYLKKGRYAQRVGTGAPVYL 60
Query: 236 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 415
AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
Query: 416 NPVLLPKNSGKTAAKEPKSPSKATKSPKKAA 508
NPVLLPK + + KSP+KA +SPKKAA
Sbjct: 121 NPVLLPKKTASKEKEGAKSPAKAGRSPKKAA 151
>gi|47026919|gb|AAT08680.1| histone H2A [Hyacinthus orientalis]
Length = 152
Score = 257 bits (654), Expect = 1e-066
Identities = 129/151 (85%), Positives = 136/151 (90%)
Frame = +2
Query: 56 METGGKFKKGAGGRKAGGPKKKPVTRSTKAGLQFPVGRIGRYLKNGRYAQRVGSGAPVYL 235
METGGK KKGAGGRK GGP+KK V+RS KAGLQFPVGR+GRYLK GRYAQRVG+GAPVYL
Sbjct: 1 METGGKIKKGAGGRKGGGPRKKSVSRSVKAGLQFPVGRLGRYLKKGRYAQRVGTGAPVYL 60
Query: 236 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 415
AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
Sbjct: 61 AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI 120
Query: 416 NPVLLPKNSGKTAAKEPKSPSKATKSPKKAA 508
NPVLLPK + KSP+KA +SPKKAA
Sbjct: 121 NPVLLPKKMASKEKEGAKSPAKAGRSPKKAA 151
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,507,433,854
Number of Sequences: 7387702
Number of Extensions: 203507433854
Number of Successful Extensions: 120256368
Number of sequences better than 0.0: 0
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