BLASTX 7.6.2
Query= RU06444 /QuerySize=1184
(1183 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157338008|emb|CAO39052.1| unnamed protein product [Vitis vini... 367 1e-099
gi|15239706|ref|NP_200279.1| ILR3 (IAA-LEUCINE RESISTANT3); DNA ... 341 7e-092
gi|21592325|gb|AAM64276.1| bHLH transcription factor, putative [... 340 2e-091
gi|195970356|gb|ACG60665.1| basic helix-loop-helix protein [Nico... 339 4e-091
gi|118489286|gb|ABK96448.1| unknown [Populus trichocarpa x Popul... 317 2e-084
>gi|157338008|emb|CAO39052.1| unnamed protein product [Vitis vinifera]
Length = 237
Score = 367 bits (942), Expect = 1e-099
Identities = 186/237 (78%), Positives = 207/237 (87%), Gaps = 5/237 (2%)
Frame = +2
Query: 140 MVSPENTNWLYDYGLMD-----DANFPVSSSAFNWPVQPNIPGSSSVSAELDGSLGDVEG 304
MVSPE TNWLY+YGL++ D+NF ++S F W + S++VS E+DGS GD +G
Sbjct: 1 MVSPEATNWLYEYGLIEDIPVPDSNFANTNSGFAWTPVQALNTSANVSGEIDGSFGDSDG 60
Query: 305 LKESGSKKRVRSESSSASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDA 484
+KE+GSKKRVRSES ASSSKACREKLRRDRLNDKF+ELGSILEPGRPPKTDK++ILIDA
Sbjct: 61 IKETGSKKRVRSESCGASSSKACREKLRRDRLNDKFMELGSILEPGRPPKTDKSSILIDA 120
Query: 485 VRMVNQLRVEAQKLKDSNSSLQEKIKELKTEKTELRDEKQRLKSEKEKLEQQLKAMTAQP 664
VRMV QLR E+QKLKDSNSSLQEKIKELK EK ELRDEKQRLK+EKEKLEQQLKAM AQP
Sbjct: 121 VRMVTQLRGESQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKAMNAQP 180
Query: 665 SFMPAPPAIPAAFAAQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 835
SF+P P+IPAAFAAQGQA GNK+VPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 SFLPPVPSIPAAFAAQGQAGGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 237
>gi|15239706|ref|NP_200279.1| ILR3 (IAA-LEUCINE RESISTANT3); DNA binding /
transcription factor [Arabidopsis thaliana]
Length = 234
Score = 341 bits (874), Expect = 7e-092
Identities = 179/234 (76%), Positives = 194/234 (82%), Gaps = 2/234 (0%)
Frame = +2
Query: 140 MVSPENTNWLYDYGLMDDANFPVSSSAFNWPVQPNIPGSSSVSAELDGSLGDVEGLKESG 319
MVSPEN NW+ D D +F + F+WPVQ I SS+ SA +DGS G+ E KE G
Sbjct: 1 MVSPENANWICDLIDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPG 60
Query: 320 SKKRVRSESSSASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVN 499
SKKR R ESSSA+SSKACREK RRDRLNDKF+ELG+ILEPG PPKTDKAAIL+DAVRMV
Sbjct: 61 SKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVT 120
Query: 500 QLRVEAQKLKDSNSSLQEKIKELKTEKTELRDEKQRLKSEKEKLEQQLKAMTA-QPSFMP 676
QLR EAQKLKDSNSSLQ+KIKELKTEK ELRDEKQRLK+EKEKLEQQLKAM A QPSF P
Sbjct: 121 QLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFP 180
Query: 677 APPAIPAAFA-AQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 835
APP +P AFA AQGQA GNKMVP I YPGVAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 181 APPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234
>gi|21592325|gb|AAM64276.1| bHLH transcription factor, putative [Arabidopsis
thaliana]
Length = 234
Score = 340 bits (870), Expect = 2e-091
Identities = 178/234 (76%), Positives = 194/234 (82%), Gaps = 2/234 (0%)
Frame = +2
Query: 140 MVSPENTNWLYDYGLMDDANFPVSSSAFNWPVQPNIPGSSSVSAELDGSLGDVEGLKESG 319
MVSPEN NW+ D D +F + F+WPVQ I SS+ SA +DGS G+ E KE G
Sbjct: 1 MVSPENANWICDLIDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPG 60
Query: 320 SKKRVRSESSSASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVN 499
SKKR R ESSSA+SSKACREK RRDRLNDKF+ELG+ILEPG PPKTDKAAIL+DAVRMV
Sbjct: 61 SKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVT 120
Query: 500 QLRVEAQKLKDSNSSLQEKIKELKTEKTELRDEKQRLKSEKEKLEQQLKAMTA-QPSFMP 676
QLR EAQKLKDSNSSLQ+KIKELKTEK ELRDEKQRLK+EKEKLEQQLKA+ A QPSF P
Sbjct: 121 QLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAINAPQPSFFP 180
Query: 677 APPAIPAAFA-AQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 835
APP +P AFA AQGQA GNKMVP I YPGVAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 181 APPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234
>gi|195970356|gb|ACG60665.1| basic helix-loop-helix protein [Nicotiana tabacum]
Length = 233
Score = 339 bits (868), Expect = 4e-091
Identities = 171/234 (73%), Positives = 196/234 (83%), Gaps = 7/234 (2%)
Frame = +2
Query: 140 MVSPENTNWLYDYGL----MDDANFPVSSSAFNWPVQPNIPGSSSVSAELDGSLGDVEGL 307
MVSPENTNWLYDYG + D+NF ++S FNWP+Q N+ GS +VSAE+DGS+G+ +
Sbjct: 1 MVSPENTNWLYDYGFEESAVPDSNFSATASGFNWPMQ-NLNGSRNVSAEVDGSIGESDYP 59
Query: 308 KESGSKKRVRSESSSASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAV 487
KE+GSKKR R ES + +SSKACREK RRDRLNDKF ELG++LEPGRPPKTDK+AIL+DAV
Sbjct: 60 KENGSKKRARVESCAPTSSKACREKQRRDRLNDKFTELGALLEPGRPPKTDKSAILVDAV 119
Query: 488 RMVNQLRVEAQKLKDSNSSLQEKIKELKTEKTELRDEKQRLKSEKEKLEQQLKAMTAQPS 667
RMV QLR EAQKLKDSN +LQEKIKELK EK ELRDEKQ+LK+EKEKLEQQLK AQP
Sbjct: 120 RMVTQLRGEAQKLKDSNLNLQEKIKELKAEKNELRDEKQKLKAEKEKLEQQLKTTNAQPG 179
Query: 668 FMPAPPAIPAAFAAQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPP 829
F+ PPAIPAAFA GQ G+K+VP + YPGVAMWQFMPPAAVDTSQDHVLRPP
Sbjct: 180 FL--PPAIPAAFAPHGQVPGSKLVPIMSYPGVAMWQFMPPAAVDTSQDHVLRPP 231
>gi|118489286|gb|ABK96448.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 263
Score = 317 bits (810), Expect = 2e-084
Identities = 160/189 (84%), Positives = 172/189 (91%)
Frame = +2
Query: 269 AELDGSLGDVEGLKESGSKKRVRSESSSASSSKACREKLRRDRLNDKFVELGSILEPGRP 448
AE+DGS G+ + KE SKKR RSES SASSSKACREKLRRDRLNDKF+ELGSILEPGR
Sbjct: 75 AEIDGSFGECDVQKEPCSKKRGRSESCSASSSKACREKLRRDRLNDKFIELGSILEPGRT 134
Query: 449 PKTDKAAILIDAVRMVNQLRVEAQKLKDSNSSLQEKIKELKTEKTELRDEKQRLKSEKEK 628
PKTDKAAIL+DAVRMV QLR EAQKL+DSNSSLQEKIKELK EK ELRDEKQRLK+EKEK
Sbjct: 135 PKTDKAAILVDAVRMVTQLRDEAQKLRDSNSSLQEKIKELKAEKIELRDEKQRLKAEKEK 194
Query: 629 LEQQLKAMTAQPSFMPAPPAIPAAFAAQGQAHGNKMVPFIGYPGVAMWQFMPPAAVDTSQ 808
LE QLKAM++QPSFMPAPPAIPAAFA QGQA GNK++PFIGYPGVAMWQF+PPAAVDTSQ
Sbjct: 195 LEHQLKAMSSQPSFMPAPPAIPAAFATQGQAPGNKLMPFIGYPGVAMWQFLPPAAVDTSQ 254
Query: 809 DHVLRPPVA 835
DHVL PPVA
Sbjct: 255 DHVLHPPVA 263
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,507,433,854
Number of Sequences: 7387702
Number of Extensions: 203507433854
Number of Successful Extensions: 120256368
Number of sequences better than 0.0: 0
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