BLASTX 7.6.2
Query= RU06705 /QuerySize=2213
(2212 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|121308298|dbj|BAF43573.1| pectate lyase [Prunus persica] 417 2e-114
gi|118488789|gb|ABK96205.1| unknown [Populus trichocarpa] 404 2e-110
gi|118488323|gb|ABK95980.1| unknown [Populus trichocarpa] 395 1e-107
gi|14531296|gb|AAK66161.1| pectate lyase [Fragaria x ananassa] 381 2e-103
gi|157336882|emb|CAO71567.1| unnamed protein product [Vitis vini... 379 9e-103
>gi|121308298|dbj|BAF43573.1| pectate lyase [Prunus persica]
Length = 425
Score = 417 bits (1071), Expect = 2e-114
Identities = 199/217 (91%), Positives = 209/217 (96%), Gaps = 2/217 (0%)
Frame = -1
Query: 1918 RNGGTEELLKSSSNSSMAARVNENDDEGLNKHAVENPEEIASMVDMSIRNSTERRKLGYF 1739
RNGGTEE L+SSSNSSMAARV E DDE NKHAV++PEE+ +MVDMSIRNSTERRKLG+F
Sbjct: 14 RNGGTEE-LQSSSNSSMAARVAE-DDESFNKHAVDDPEEVVAMVDMSIRNSTERRKLGFF 71
Query: 1738 SCGTGNPIDDCWRCDPNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPKDDDPVNPRP 1559
SCGTGNPIDDCWRCD NWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDP DDDPVNPRP
Sbjct: 72 SCGTGNPIDDCWRCDSNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPRP 131
Query: 1558 GTLRHAVIQDEPLWIVFKRDMVIQLKQELLMNSFKTIDGRGVNVHIANGACITIQFVTNI 1379
GTLRHAVIQ+EPLWIVFKRDMVIQLKQEL+MNSFKTIDGRGVNVHIANGACITIQFVTNI
Sbjct: 132 GTLRHAVIQNEPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGACITIQFVTNI 191
Query: 1378 IVHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVS 1268
I+HGLHIHDCKPTGNA+VRSSPSHFGWRTMADGDAVS
Sbjct: 192 IIHGLHIHDCKPTGNALVRSSPSHFGWRTMADGDAVS 228
>gi|118488789|gb|ABK96205.1| unknown [Populus trichocarpa]
Length = 450
Score = 404 bits (1037), Expect = 2e-110
Identities = 198/253 (78%), Positives = 219/253 (86%), Gaps = 6/253 (2%)
Frame = -1
Query: 2017 SKKWILACV-SVLLLFCFVAVMSGRVSLDG--TSLIRNGGTEELLKSSSNSSMAARVNEN 1847
S+KW AC+ S +LL FV VM +G ++L R+ TE+ ++SSSN++MAAR E
Sbjct: 4 SRKW--ACMFSAVLLLLFVGVMPTTSGTNGGISALTRSVETEK-VQSSSNTTMAARSQEE 60
Query: 1846 DDEGLNKHAVENPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKNRKR 1667
D K +NPEE+ SMV+MSIRNSTERR+LGYFSCGTGNPIDDCWRCDPNWQKNRKR
Sbjct: 61 ADALNEKAVADNPEEVVSMVEMSIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWQKNRKR 120
Query: 1666 LADCGIGFGRNAIGGRDGRFYVVTDPKDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQ 1487
LADCGIGFGRNAIGGRDGRFYVVTDP D+DPVNPRPGTLRHAVIQD PLWIVFKRDMVIQ
Sbjct: 121 LADCGIGFGRNAIGGRDGRFYVVTDPSDNDPVNPRPGTLRHAVIQDAPLWIVFKRDMVIQ 180
Query: 1486 LKQELLMNSFKTIDGRGVNVHIANGACITIQFVTNIIVHGLHIHDCKPTGNAMVRSSPSH 1307
LKQEL+MNSFKTIDGRGVNVHIANG CITIQFVTN+I+HGLHIHDCKPTGNAMVRSSPSH
Sbjct: 181 LKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSH 240
Query: 1306 FGWRTMADGDAVS 1268
+GWRTMADGDAVS
Sbjct: 241 YGWRTMADGDAVS 253
>gi|118488323|gb|ABK95980.1| unknown [Populus trichocarpa]
Length = 452
Score = 395 bits (1013), Expect = 1e-107
Identities = 187/255 (73%), Positives = 209/255 (81%)
Frame = -1
Query: 2032 MAVSESKKWILACVSVLLLFCFVAVMSGRVSLDGTSLIRNGGTEELLKSSSNSSMAARVN 1853
M ++ +KW+ +V++L V + R + G S + E +SSSNS+MAAR
Sbjct: 1 MTMAVPQKWVCVFSAVIVLLFVGVVATSRPDVVGISALTRNVEAEKEQSSSNSTMAARSQ 60
Query: 1852 ENDDEGLNKHAVENPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKNR 1673
E D K +PEE+ SMV+M+IRNSTERR+LGYFSCGTGNPIDDCWRCDPNW KNR
Sbjct: 61 EEADAFNEKAVAADPEEVVSMVEMNIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWHKNR 120
Query: 1672 KRLADCGIGFGRNAIGGRDGRFYVVTDPKDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMV 1493
KRLADCGIGFGRNAIGGRDGRFYVVTD D DPVNPRPGTLRHAVIQD PLWIVFKRDMV
Sbjct: 121 KRLADCGIGFGRNAIGGRDGRFYVVTDSSDHDPVNPRPGTLRHAVIQDAPLWIVFKRDMV 180
Query: 1492 IQLKQELLMNSFKTIDGRGVNVHIANGACITIQFVTNIIVHGLHIHDCKPTGNAMVRSSP 1313
IQLKQEL+MNSFKTIDGRGVNVHIANG CITIQFVTN+I+HGLHIHDCKPTGNAMVRSSP
Sbjct: 181 IQLKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSP 240
Query: 1312 SHFGWRTMADGDAVS 1268
SH+GWRTMADGDA+S
Sbjct: 241 SHYGWRTMADGDAIS 255
>gi|14531296|gb|AAK66161.1| pectate lyase [Fragaria x ananassa]
Length = 368
Score = 381 bits (976), Expect = 2e-103
Identities = 180/187 (96%), Positives = 182/187 (97%)
Frame = -3
Query: 1235 HNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGE 1056
HNSLSNCADGLVDAVMGSTAITISNNH THHNEVMLLGHSDSYTRDKQMQVTIAYNHFGE
Sbjct: 182 HNSLSNCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGE 241
Query: 1055 GLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPANPFAKEVTKRVE 876
GLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA+PTINSQGNRYAAP NPFAKEVTKRVE
Sbjct: 242 GLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYAAPTNPFAKEVTKRVE 301
Query: 875 TAQTQWRGWNWRSEGDLLLNGAFFTPSGAGASAVYARASSLGAKSSAMVGTITAGAGVLG 696
T+QTQWRGWNWRSEGDLLLNGAFFTPSGAGASAVYARASSLGAKSSAMVGTITA AG LG
Sbjct: 302 TSQTQWRGWNWRSEGDLLLNGAFFTPSGAGASAVYARASSLGAKSSAMVGTITASAGALG 361
Query: 695 CRRGHTC 675
CRRG TC
Sbjct: 362 CRRGRTC 368
>gi|157336882|emb|CAO71567.1| unnamed protein product [Vitis vinifera]
Length = 407
Score = 379 bits (971), Expect = 9e-103
Identities = 172/188 (91%), Positives = 183/188 (97%)
Frame = -1
Query: 1831 NKHAVENPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKNRKRLADCG 1652
N+HAV++P+ +ASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCD NWQKNRKRLADCG
Sbjct: 23 NEHAVDDPDAVASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDHNWQKNRKRLADCG 82
Query: 1651 IGFGRNAIGGRDGRFYVVTDPKDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQEL 1472
IGFGRNAIGGRDGRFYVVTDP DDDPVNP+PGTLRHAVIQD PLWIVFKRDMVI LKQEL
Sbjct: 83 IGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRHAVIQDAPLWIVFKRDMVITLKQEL 142
Query: 1471 LMNSFKTIDGRGVNVHIANGACITIQFVTNIIVHGLHIHDCKPTGNAMVRSSPSHFGWRT 1292
+MNSFKTIDGRGVNVHIANGACIT+QFVTN+I+HGLHIHDCKPTGNAMVRSSPSHFGWRT
Sbjct: 143 IMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRT 202
Query: 1291 MADGDAVS 1268
MADGDA+S
Sbjct: 203 MADGDAIS 210
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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