BLASTX 7.6.2
Query= RU07619 /QuerySize=616
(615 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|3023961|sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like... 166 2e-039
gi|210160856|gb|ACJ09316.1| KNAT3-like transcription factor [Jug... 132 2e-029
gi|167522884|ref|XP_001745779.1| hypothetical protein [Monosiga ... 59 3e-007
gi|209879295|ref|XP_002141088.1| hypothetical protein [Cryptospo... 55 4e-006
gi|133900667|ref|NP_001023035.2| C-type LECtin family member (cl... 54 9e-006
>gi|3023961|sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 (KNAP3)
Length = 427
Score = 166 bits (418), Expect = 2e-039
Identities = 91/139 (65%), Positives = 100/139 (71%), Gaps = 11/139 (7%)
Frame = +1
Query: 214 MAYHNHLSGDLPLHHFTDQAQQQQQQSQSFMTDQPDPNSKSTEPHHHPFQTAPNWLNSAL 393
MAYHNHLS DLPLHHFTDQ Q QQ QS DQPDPNSK EP HH FQ APNWLNSAL
Sbjct: 1 MAYHNHLSQDLPLHHFTDQTHHQHQQYQS---DQPDPNSKPPEP-HHSFQPAPNWLNSAL 56
Query: 394 LRTQYAATTSGADASNA---GGGSTNFLNLHTASDSTAASQASNQWLS---RPILQRNHS 555
LR T+ +++NA GGG +NFLNLH + +AASQASNQWLS RPIL RNHS
Sbjct: 57 LRNFTNTDTNPTNSNNANNNGGGVSNFLNLHVTASDSAASQASNQWLSQSHRPILHRNHS 116
Query: 556 DVIDDVAAGAGDSMMAGAI 612
DV DDV AGDSM+A A+
Sbjct: 117 DVNDDVTV-AGDSMIAAAL 134
>gi|210160856|gb|ACJ09316.1| KNAT3-like transcription factor [Juglans nigra]
Length = 482
Score = 132 bits (332), Expect = 2e-029
Identities = 71/106 (66%), Positives = 78/106 (73%), Gaps = 7/106 (6%)
Frame = +1
Query: 319 DPNSKSTEPHHHPFQTAPNWLNSALLRTQYA------ATTSGADASNAGGGSTNFLNLHT 480
DP+SK HHH QTAPNWLNSALLRTQ T +GA +N STNFLNLHT
Sbjct: 52 DPSSKPGSNHHHHLQTAPNWLNSALLRTQAQYNDTSNTTAAGAANNNNNTNSTNFLNLHT 111
Query: 481 ASDSTAASQASNQWLSRPILQRNHSDVIDDVA-AGAGDSMMAGAIS 615
ASDSTAASQ+SNQWLSRPIL RNHS+VIDDVA A AGD M+A +S
Sbjct: 112 ASDSTAASQSSNQWLSRPILHRNHSEVIDDVASAAAGDPMIAATMS 157
>gi|167522884|ref|XP_001745779.1| hypothetical protein [Monosiga brevicollis
MX1]
Length = 1543
Score = 59 bits (140), Expect = 3e-007
Identities = 29/70 (41%), Positives = 36/70 (51%)
Frame = +2
Query: 386 APSSAPSTPPPPPAQTPATPEEEALIFSTSTRPPTPPPPLRPPTNGSPARSSSATTATSS 565
AP +AP PP PPA PA P L+ + S PP PPPP P +P +A ++S
Sbjct: 1230 APPAAPPAPPAPPAVPPAPPAPAPLMGTASLPPPPPPPPPPPGGAAAPKAPVNALQSSSG 1289
Query: 566 TTSLPAPATP 595
PAP TP
Sbjct: 1290 LAKPPAPPTP 1299
>gi|209879295|ref|XP_002141088.1| hypothetical protein [Cryptosporidium muris
RN66]
Length = 1679
Score = 55 bits (130), Expect = 4e-006
Identities = 32/124 (25%), Positives = 53/124 (42%)
Frame = +2
Query: 221 TTTTSLETYLSTTSQTKPNSSSNRASPS*QTNPTQIPSPRSPTTTRFRPLRIG*TAPSSA 400
TTTT+ T +TT+ T +++ + + T T P + TTT +P T
Sbjct: 404 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTKKPTTTTTTTRKPTTTTTTTEKPT 463
Query: 401 PSTPPPPPAQTPATPEEEALIFSTSTRPPTPPPPLRPPTNGSPARSSSATTATSSTTSLP 580
+T P T T E+ +T+ +P T PT + + + TT T++TT+
Sbjct: 464 TTTTTEKPTTTTTTTEKPTTTTTTTEKPTTTTTTTEKPTTTTTTKKPTTTTTTTTTTTTT 523
Query: 581 APAT 592
T
Sbjct: 524 TTTT 527
>gi|133900667|ref|NP_001023035.2| C-type LECtin family member (clec-200)
[Caenorhabditis elegans]
Length = 460
Score = 54 bits (127), Expect = 9e-006
Identities = 33/124 (26%), Positives = 53/124 (42%)
Frame = +2
Query: 221 TTTTSLETYLSTTSQTKPNSSSNRASPS*QTNPTQIPSPRSPTTTRFRPLRIG*TAPSSA 400
TT + T TT+ T P +++ + + T T + +PTTT P A +++
Sbjct: 193 TTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Query: 401 PSTPPPPPAQTPATPEEEALIFSTSTRPPTPPPPLRPPTNGSPARSSSATTATSSTTSLP 580
+T P T T + + +T P T P T +S++ TT T+ TTS P
Sbjct: 253 ETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTP 312
Query: 581 APAT 592
T
Sbjct: 313 TTTT 316
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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