BLASTX 7.6.2
Query= RU07818 /QuerySize=220
(219 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|115475996|ref|NP_001061594.1| Os08g0343300 [Oryza sativa (jap... 121 2e-026
gi|194702088|gb|ACF85128.1| unknown [Zea mays] 119 8e-026
gi|194704782|gb|ACF86475.1| unknown [Zea mays] 117 2e-025
gi|18379079|ref|NP_563681.1| transcription initiation factor IIE... 110 4e-023
gi|3850583|gb|AAC72123.1| Contains similarity to transcription i... 110 4e-023
>gi|115475996|ref|NP_001061594.1| Os08g0343300 [Oryza sativa (japonica
cultivar-group)]
Length = 462
Score = 121 bits (302), Expect = 2e-026
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = -3
Query: 217 CPNCGKRYNALDALQLISLEDEYFHCESCNGELVAESDKLASQDVGDGDSNARRQRREKL 38
CPNC KRY+A DALQLIS DEYFHCE+CNGELVAESDKLAS+++GDGD NAR++RREKL
Sbjct: 164 CPNCKKRYSAFDALQLISYTDEYFHCENCNGELVAESDKLASEEMGDGDDNARKRRREKL 223
Query: 37 KDMLQNMEVQLK 2
KDM Q ++ QLK
Sbjct: 224 KDMQQRIDEQLK 235
>gi|194702088|gb|ACF85128.1| unknown [Zea mays]
Length = 457
Score = 119 bits (297), Expect = 8e-026
Identities = 53/72 (73%), Positives = 63/72 (87%)
Frame = -3
Query: 217 CPNCGKRYNALDALQLISLEDEYFHCESCNGELVAESDKLASQDVGDGDSNARRQRREKL 38
CP+C KRY+A DALQL+S DEYFHCE+CNGELVAESDKLAS+++GDGD N R++RREKL
Sbjct: 162 CPSCNKRYSAFDALQLVSYTDEYFHCETCNGELVAESDKLASEEMGDGDDNVRKRRREKL 221
Query: 37 KDMLQNMEVQLK 2
KDM Q +E QLK
Sbjct: 222 KDMQQRIEEQLK 233
>gi|194704782|gb|ACF86475.1| unknown [Zea mays]
Length = 460
Score = 117 bits (293), Expect = 2e-025
Identities = 52/72 (72%), Positives = 62/72 (86%)
Frame = -3
Query: 217 CPNCGKRYNALDALQLISLEDEYFHCESCNGELVAESDKLASQDVGDGDSNARRQRREKL 38
CP+C KRY+A DALQL+S DEYFHCE+CNGELVAE DKLAS+++GDGD N R++RREKL
Sbjct: 162 CPSCNKRYSAFDALQLVSYTDEYFHCETCNGELVAEDDKLASEEMGDGDDNVRKRRREKL 221
Query: 37 KDMLQNMEVQLK 2
KDM Q +E QLK
Sbjct: 222 KDMQQRIEEQLK 233
>gi|18379079|ref|NP_563681.1| transcription initiation factor IIE (TFIIE) alpha
subunit family protein / general transcription factor TFIIE family
protein [Arabidopsis thaliana]
Length = 479
Score = 110 bits (274), Expect = 4e-023
Identities = 49/72 (68%), Positives = 62/72 (86%)
Frame = -3
Query: 217 CPNCGKRYNALDALQLISLEDEYFHCESCNGELVAESDKLASQDVGDGDSNARRQRREKL 38
CPNC ++YNALDAL+LIS+ D+ FHCE+CNGELV E +KL S++V DGD NARR+RRE L
Sbjct: 168 CPNCQRKYNALDALRLISMVDDSFHCENCNGELVVECNKLTSEEVVDGDDNARRRRRENL 227
Query: 37 KDMLQNMEVQLK 2
K+MLQ +EVQ+K
Sbjct: 228 KNMLQKLEVQMK 239
>gi|3850583|gb|AAC72123.1| Contains similarity to transcription initiation
factor IIE, alpha subunit gb|X63468 from Homo sapiens. [Arabidopsis
thaliana]
Length = 506
Score = 110 bits (274), Expect = 4e-023
Identities = 49/72 (68%), Positives = 62/72 (86%)
Frame = -3
Query: 217 CPNCGKRYNALDALQLISLEDEYFHCESCNGELVAESDKLASQDVGDGDSNARRQRREKL 38
CPNC ++YNALDAL+LIS+ D+ FHCE+CNGELV E +KL S++V DGD NARR+RRE L
Sbjct: 177 CPNCQRKYNALDALRLISMVDDSFHCENCNGELVVECNKLTSEEVVDGDDNARRRRRENL 236
Query: 37 KDMLQNMEVQLK 2
K+MLQ +EVQ+K
Sbjct: 237 KNMLQKLEVQMK 248
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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