BLASTX 7.6.2
Query= RU07862 /QuerySize=305
(304 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18414193|ref|NP_568114.1| (Cell division control protein 48 h... 196 6e-049
gi|11265361|pir||T48355 transitional endoplasmic reticulum ATPas... 196 6e-049
gi|2492504|sp|Q96372.1|CDC48_CAPAN RecName: Full=Cell division c... 195 1e-048
gi|15231775|ref|NP_190891.1| cell division cycle protein 48, put... 195 1e-048
gi|1705678|sp|P54774.1|CDC48_SOYBN RecName: Full=Cell division c... 193 5e-048
>gi|18414193|ref|NP_568114.1| (Cell division control protein 48 homolog E);
ATPase [Arabidopsis thaliana]
Length = 810
Score = 196 bits (496), Expect = 6e-049
Identities = 95/98 (96%), Positives = 97/98 (98%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 189 CVLFFDELDSIATQRGNSSGDAGGAADRVLNQLLTEMD 302
CVLFFDELDSIATQRGNS+GDAGGAADRVLNQLLTEMD
Sbjct: 575 CVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMD 612
>gi|11265361|pir||T48355 transitional endoplasmic reticulum ATPase - Arabidopsis
thaliana
Length = 843
Score = 196 bits (496), Expect = 6e-049
Identities = 95/98 (96%), Positives = 97/98 (98%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 548 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 607
Query: 189 CVLFFDELDSIATQRGNSSGDAGGAADRVLNQLLTEMD 302
CVLFFDELDSIATQRGNS+GDAGGAADRVLNQLLTEMD
Sbjct: 608 CVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMD 645
>gi|2492504|sp|Q96372.1|CDC48_CAPAN RecName: Full=Cell division cycle protein 48
homolog
Length = 805
Score = 195 bits (494), Expect = 1e-048
Identities = 95/98 (96%), Positives = 97/98 (98%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 189 CVLFFDELDSIATQRGNSSGDAGGAADRVLNQLLTEMD 302
CVLFFDELDSIATQRG+SSGDAGGAADRVLNQLLTEMD
Sbjct: 576 CVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMD 613
>gi|15231775|ref|NP_190891.1| cell division cycle protein 48, putative / CDC48,
putative [Arabidopsis thaliana]
Length = 815
Score = 195 bits (494), Expect = 1e-048
Identities = 96/98 (97%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 189 CVLFFDELDSIATQRGNSSGDAGGAADRVLNQLLTEMD 302
CVLFFDELDSIATQRGNS GDAGGAADRVLNQLLTEMD
Sbjct: 576 CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMD 613
>gi|1705678|sp|P54774.1|CDC48_SOYBN RecName: Full=Cell division cycle protein 48
homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP
Length = 807
Score = 193 bits (488), Expect = 5e-048
Identities = 94/98 (95%), Positives = 96/98 (97%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 189 CVLFFDELDSIATQRGNSSGDAGGAADRVLNQLLTEMD 302
CVLFFDELDSIATQRG+S GDAGGAADRVLNQLLTEMD
Sbjct: 576 CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMD 613
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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