BLASTX 7.6.2
Query= RU08333 /QuerySize=259
(258 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|66816771|gb|AAY56753.1| DELLA protein [Malus x domestica] 128 1e-028
gi|66816781|gb|AAY56754.1| DELLA protein [Malus x domestica] 120 4e-026
gi|159902503|gb|ABX10758.1| putative DELLA protein [Selaginella ... 101 3e-020
gi|168043685|ref|XP_001774314.1| AtGAI1 GRAS E3 ubiquitin ligase... 96 7e-019
gi|168002778|ref|XP_001754090.1| GAI1-like E3 ubiquitin ligase p... 94 3e-018
>gi|66816771|gb|AAY56753.1| DELLA protein [Malus x domestica]
Length = 546
Score = 128 bits (321), Expect = 1e-028
Identities = 62/78 (79%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
Frame = -3
Query: 256 ELAGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQVMPLP 77
E AGF PLHLGSNAFKQASMLLTLFSAEGYRVEE +GCLTLGWH+RPLIAASAWQVMP+
Sbjct: 467 EQAGFKPLHLGSNAFKQASMLLTLFSAEGYRVEENQGCLTLGWHNRPLIAASAWQVMPMA 526
Query: 76 EATATATNPLGIVNHSAN 23
EATA P+GI+N + N
Sbjct: 527 EATAN-QQPVGIINQNNN 543
>gi|66816781|gb|AAY56754.1| DELLA protein [Malus x domestica]
Length = 546
Score = 120 bits (299), Expect = 4e-026
Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQVMPLPEA 71
AGFSPLHLGSNAFKQASMLLTLFSAEGYRVEE +GCLTLGWHSRPLIAASAWQVM + EA
Sbjct: 468 AGFSPLHLGSNAFKQASMLLTLFSAEGYRVEENQGCLTLGWHSRPLIAASAWQVMHVAEA 527
Query: 70 TATATNPLGIVNHSAN 23
T +GI+N + N
Sbjct: 528 TIN-HQTVGILNQNNN 542
>gi|159902503|gb|ABX10758.1| putative DELLA protein [Selaginella
moellendorffii]
Length = 646
Score = 101 bits (249), Expect = 3e-020
Identities = 44/53 (83%), Positives = 51/53 (96%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQ 92
+GF PL+LGSNAFKQA+MLLTLFS +GYRVEEK+GCLTLGWHSRPL+AASAW+
Sbjct: 592 SGFQPLYLGSNAFKQANMLLTLFSGDGYRVEEKDGCLTLGWHSRPLVAASAWE 644
>gi|168043685|ref|XP_001774314.1| AtGAI1 GRAS E3 ubiquitin ligase protein
[Physcomitrella patens subsp. patens]
Length = 553
Score = 96 bits (237), Expect = 7e-019
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQ 92
AG+ P+ LG NAFKQASMLLT+FS EGYRVEEK GCLTLGWHSRPLIAASAW+
Sbjct: 499 AGYRPIQLGLNAFKQASMLLTMFSGEGYRVEEKLGCLTLGWHSRPLIAASAWK 551
>gi|168002778|ref|XP_001754090.1| GAI1-like E3 ubiquitin ligase protein
[Physcomitrella patens subsp. patens]
Length = 552
Score = 94 bits (232), Expect = 3e-018
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQ 92
AG+ P+ LG NAFKQASMLLT+FS +GYRVEEK GCLTLGWH+RPLI+ASAWQ
Sbjct: 498 AGYRPIQLGLNAFKQASMLLTMFSGDGYRVEEKLGCLTLGWHTRPLISASAWQ 550
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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