BLASTX 7.6.2
Query= RU08352 /QuerySize=907
(906 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157327965|emb|CAO16929.1| unnamed protein product [Vitis vini... 177 2e-042
gi|87162890|gb|ABD28685.1| Zinc finger, Dof-type [Medicago trunc... 166 2e-039
gi|42562375|ref|NP_174152.3| Dof-type zinc finger domain-contain... 135 5e-030
gi|79318762|ref|NP_001031100.1| Dof-type zinc finger domain-cont... 135 5e-030
gi|111183169|gb|ABH07906.1| Dof zinc finger protein [Lycopersico... 133 2e-029
>gi|157327965|emb|CAO16929.1| unnamed protein product [Vitis vinifera]
Length = 295
Score = 177 bits (447), Expect = 2e-042
Identities = 86/136 (63%), Positives = 104/136 (76%), Gaps = 4/136 (2%)
Frame = -1
Query: 471 MGLSTKQVSSDGLDWSLILLQAQSFELPKPPVARRQQQQSQEQS-EQLKCPRCESTNTKF 295
M LS+KQVS DG+DW LLQ S EL KPP+ RRQQQQ Q+Q E LKCPRC+STNTKF
Sbjct: 1 MVLSSKQVSGDGIDWGHTLLQGGSLELHKPPMMRRQQQQQQQQQLEPLKCPRCDSTNTKF 60
Query: 294 CYYNNYNKTQPRHFCRACKRHWTNGGTLRNVPVGGHGRKNKR--TRKPNSSASAAKTTTN 121
CY+NNYNK+QPRHFC++CKRHWT GGTLRNVPVGG GRKNKR T ++A+A T T+
Sbjct: 61 CYFNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGG-GRKNKRPKTSATATAAAATPTVTS 119
Query: 120 GASTIATTTRVNNTNL 73
+T T++ N +N+
Sbjct: 120 SPATPTTSSITNRSNI 135
>gi|87162890|gb|ABD28685.1| Zinc finger, Dof-type [Medicago truncatula]
Length = 274
Score = 166 bits (420), Expect = 2e-039
Identities = 82/131 (62%), Positives = 99/131 (75%), Gaps = 4/131 (3%)
Frame = -1
Query: 468 GLSTKQVSSDGLDWSLILLQAQSFELPKPPVARRQQQQSQEQSEQLKCPRCESTNTKFCY 289
GLS+KQVSS G+DW+ LLQ Q+ ELPK R+QQQQ+ Q E + CPRC+STNTKFCY
Sbjct: 2 GLSSKQVSSRGVDWNQTLLQDQNLELPKTLPMRKQQQQN-HQLEAVNCPRCDSTNTKFCY 60
Query: 288 YNNYNKTQPRHFCRACKRHWTNGGTLRNVPVGGHGRKNKRTRKPNSSASAAKTTTNGAST 109
YNNYNK+QPRHFCRACKRHWT GGTLRNVPVGG RKNKR + S ++ +KTT +++
Sbjct: 61 YNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGG-VRKNKRVKISTSISTTSKTTI--STS 117
Query: 108 IATTTRVNNTN 76
TT+ N N
Sbjct: 118 FTTTSNANRLN 128
>gi|42562375|ref|NP_174152.3| Dof-type zinc finger domain-containing protein
[Arabidopsis thaliana]
Length = 311
Score = 135 bits (339), Expect = 5e-030
Identities = 60/99 (60%), Positives = 77/99 (77%), Gaps = 6/99 (6%)
Frame = -1
Query: 372 RRQQQQSQEQSEQLKCPRCESTNTKFCYYNNYNKTQPRHFCRACKRHWTNGGTLRNVPVG 193
++QQQQ Q+ QLKCPRC+S+NTKFCYYNNY+ +QPRHFC+ACKR+WT GGTLRNVPVG
Sbjct: 14 QQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVG 73
Query: 192 GHGRKNKRTRKPNSSASAAKTTTNGASTIATTTRVNNTN 76
G RKNKR ++P+++ TT AST++TT + N
Sbjct: 74 GSYRKNKRVKRPSTA------TTTTASTVSTTNSSSPNN 106
>gi|79318762|ref|NP_001031100.1| Dof-type zinc finger domain-containing protein
[Arabidopsis thaliana]
Length = 325
Score = 135 bits (339), Expect = 5e-030
Identities = 60/99 (60%), Positives = 77/99 (77%), Gaps = 6/99 (6%)
Frame = -1
Query: 372 RRQQQQSQEQSEQLKCPRCESTNTKFCYYNNYNKTQPRHFCRACKRHWTNGGTLRNVPVG 193
++QQQQ Q+ QLKCPRC+S+NTKFCYYNNY+ +QPRHFC+ACKR+WT GGTLRNVPVG
Sbjct: 28 QQQQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVG 87
Query: 192 GHGRKNKRTRKPNSSASAAKTTTNGASTIATTTRVNNTN 76
G RKNKR ++P+++ TT AST++TT + N
Sbjct: 88 GSYRKNKRVKRPSTA------TTTTASTVSTTNSSSPNN 120
>gi|111183169|gb|ABH07906.1| Dof zinc finger protein [Lycopersicon esculentum]
Length = 379
Score = 133 bits (334), Expect = 2e-029
Identities = 60/102 (58%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = -1
Query: 381 PVARRQQQQSQEQSEQLKCPRCESTNTKFCYYNNYNKTQPRHFCRACKRHWTNGGTLRNV 202
P+ QQQ Q+ LKCPRC+S+NTKFCYYNNY+ +QPRHFC+ACKR+WT GGTLRNV
Sbjct: 17 PIQDPSQQQQQQPPPHLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNV 76
Query: 201 PVGGHGRKNKRTRKPNSSASAAKTTTNGASTIATTTRVNNTN 76
PVGG RKNKR ++P+ ++S++ TTT + I TT+ N N
Sbjct: 77 PVGGGCRKNKRIKRPSVNSSSSTTTT--SHDIITTSTPNIVN 116
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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