BLASTX 7.6.2
Query= RU08397 /QuerySize=381
(380 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18402411|ref|NP_566651.1| zinc finger (C3HC4-type RING finger... 122 1e-026
gi|21536693|gb|AAM61025.1| unknown [Arabidopsis thaliana] 122 1e-026
gi|157352596|emb|CAO44394.1| unnamed protein product [Vitis vini... 112 1e-023
gi|116791710|gb|ABK26080.1| unknown [Picea sitchensis] 86 5e-016
gi|10334499|emb|CAC10211.1| hypothetical protein [Cicer arietinum] 80 4e-014
>gi|18402411|ref|NP_566651.1| zinc finger (C3HC4-type RING finger) family
protein [Arabidopsis thaliana]
Length = 340
Score = 122 bits (304), Expect = 1e-026
Identities = 64/107 (59%), Positives = 81/107 (75%), Gaps = 4/107 (3%)
Frame = -2
Query: 331 EEEVTTQLAEPPSPNAPQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYG 152
EE + + E P+P + S+R PFTNLSQ+DADLALARTLQEQERAYMML MN+E SDYG
Sbjct: 66 EESGSISVGELPAPRS-SSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYG 124
Query: 151 SWEAGSYVHDDEDDFHDDTDGNDDEEQYDGTDTDND-EEDAFDVHAH 14
SWE GSYV+ DED+F DD + D+++ D +TD+D +ED DV+ H
Sbjct: 125 SWETGSYVY-DEDEF-DDPENEDEDDDEDEYETDDDPQEDGLDVNVH 169
>gi|21536693|gb|AAM61025.1| unknown [Arabidopsis thaliana]
Length = 340
Score = 122 bits (304), Expect = 1e-026
Identities = 64/107 (59%), Positives = 81/107 (75%), Gaps = 4/107 (3%)
Frame = -2
Query: 331 EEEVTTQLAEPPSPNAPQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYG 152
EE + + E P+P + S+R PFTNLSQ+DADLALARTLQEQERAYMML MN+E SDYG
Sbjct: 66 EESGSISVGELPAPRS-SSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYG 124
Query: 151 SWEAGSYVHDDEDDFHDDTDGNDDEEQYDGTDTDND-EEDAFDVHAH 14
SWE GSYV+ DED+F DD + D+++ D +TD+D +ED DV+ H
Sbjct: 125 SWETGSYVY-DEDEF-DDPENEDEDDDEDEYETDDDPQEDGLDVNVH 169
>gi|157352596|emb|CAO44394.1| unnamed protein product [Vitis vinifera]
Length = 263
Score = 112 bits (278), Expect = 1e-023
Identities = 58/78 (74%), Positives = 65/78 (83%), Gaps = 5/78 (6%)
Frame = -2
Query: 334 EEEEVTTQLAEPPSPN---AP--QSSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNN 170
EE+ + AE P+PN AP QSSRTPFTNLSQVDADLALARTLQEQERAYMMLR+N
Sbjct: 28 EEQNPNSPAAEDPNPNSNQAPPRQSSRTPFTNLSQVDADLALARTLQEQERAYMMLRING 87
Query: 169 EGSDYGSWEAGSYVHDDE 116
EGSDYGSWEAGSY +++E
Sbjct: 88 EGSDYGSWEAGSYFNEEE 105
>gi|116791710|gb|ABK26080.1| unknown [Picea sitchensis]
Length = 282
Score = 86 bits (212), Expect = 5e-016
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Frame = -2
Query: 280 QSSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGSYVH----DDED 113
QSSR PFT LSQ D+DLALAR LQEQERAYMMLR N E SDY + +G+Y H DD
Sbjct: 42 QSSRQPFTALSQEDSDLALARALQEQERAYMMLRRNAESSDYETSGSGNYDHEYYIDDSG 101
Query: 112 DFHDDTDGN-DDEEQYDGTDTDNDEEDA 32
+ D+ D N DD E+ D D++E DA
Sbjct: 102 ENEDEVDANADDFEREALADGDHEEVDA 129
>gi|10334499|emb|CAC10211.1| hypothetical protein [Cicer arietinum]
Length = 233
Score = 80 bits (195), Expect = 4e-014
Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -2
Query: 175 NNEGSDYGSWEAGSYVHDDEDDF---HDDTDGNDDEEQYDGTDTDNDEEDAFDVHAH 14
NN+GSDYGSWE GSY+HDD DDF HD TD ++D+++ D + + + EDAFDVHAH
Sbjct: 1 NNDGSDYGSWEGGSYLHDDGDDFDDLHDGTDVDEDDDEDDDNEDEYENEDAFDVHAH 57
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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