BLASTX 7.6.2
Query= RU08448 /QuerySize=313
(312 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147793149|emb|CAN73090.1| hypothetical protein [Vitis vinifera] 159 5e-038
gi|118487153|gb|ABK95405.1| unknown [Populus trichocarpa] 157 2e-037
gi|147817140|emb|CAN77681.1| hypothetical protein [Vitis vinifera] 156 4e-037
gi|156145914|gb|ABU53684.1| myb transcription factor [Rosa hybri... 155 9e-037
gi|82621140|gb|ABB86258.1| putative DNA binding protein-like [So... 149 8e-035
>gi|147793149|emb|CAN73090.1| hypothetical protein [Vitis vinifera]
Length = 300
Score = 159 bits (402), Expect = 5e-038
Identities = 78/91 (85%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
Frame = +2
Query: 5 RERKRGVAWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN 184
RERKRGV WTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN
Sbjct: 80 RERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN 139
Query: 185 RRRRRSSLFDITTDTPSMNSLMEEDLALHHE 277
RRRRRSSLFDIT DT ++++EED +H E
Sbjct: 140 RRRRRSSLFDITADTFMGSTILEED-QVHQE 169
>gi|118487153|gb|ABK95405.1| unknown [Populus trichocarpa]
Length = 312
Score = 157 bits (396), Expect = 2e-037
Identities = 79/93 (84%), Positives = 83/93 (89%), Gaps = 2/93 (2%)
Frame = +2
Query: 5 RERKRGVAWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN 184
RERKRGV WTEEEH+LFLLGLQK+GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN N
Sbjct: 89 RERKRGVPWTEEEHKLFLLGLQKIGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQN 148
Query: 185 RRRRRSSLFDITTDTPSMNSLMEEDLALHHENS 283
RRRRRSSLFDITTDT M S MEED +H E +
Sbjct: 149 RRRRRSSLFDITTDT-FMGSSMEED-QVHQETA 179
>gi|147817140|emb|CAN77681.1| hypothetical protein [Vitis vinifera]
Length = 305
Score = 156 bits (394), Expect = 4e-037
Identities = 75/95 (78%), Positives = 84/95 (88%)
Frame = +2
Query: 5 RERKRGVAWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN 184
RERKRGV WTEEEH+LFL+GLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN N
Sbjct: 90 RERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLN 149
Query: 185 RRRRRSSLFDITTDTPSMNSLMEEDLALHHENSAQ 289
RRRRRSSLFDITT++ + + EE + H EN++Q
Sbjct: 150 RRRRRSSLFDITTESVTAVPMEEEQVLHHQENTSQ 184
>gi|156145914|gb|ABU53684.1| myb transcription factor [Rosa hybrid cultivar]
Length = 294
Score = 155 bits (391), Expect = 9e-037
Identities = 75/96 (78%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 RERKRGVAWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN 184
RERKRGV WTE+EH+LFLLGLQKVGKGDWRGISRN+VKTRTPTQVASHAQKYFLRR+NHN
Sbjct: 77 RERKRGVPWTEDEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNHN 136
Query: 185 RRRRRSSLFDITTDTPSMNSLMEEDLALHHENSAQL 292
RRRRRSSLFDITTD+ MEE+ H +N++ L
Sbjct: 137 RRRRRSSLFDITTDSVPATP-MEEEQVHHQDNTSHL 171
>gi|82621140|gb|ABB86258.1| putative DNA binding protein-like [Solanum
tuberosum]
Length = 297
Score = 149 bits (374), Expect = 8e-035
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +2
Query: 5 RERKRGVAWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHN 184
RERKRGV WTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR+N N
Sbjct: 89 RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLN 148
Query: 185 RRRRRSSLFDITTDTPSMNSLME 253
RRRRRSSLFDITTD+ S+ + E
Sbjct: 149 RRRRRSSLFDITTDSVSVMPIEE 171
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
|