BLASTX 7.6.2
Query= RU08744 /QuerySize=469
(468 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147795953|emb|CAN60862.1| hypothetical protein [Vitis vinifera] 169 5e-041
gi|157350511|emb|CAO40560.1| unnamed protein product [Vitis vini... 169 5e-041
gi|3142300|gb|AAC16751.1| Contains similarity to pre-mRNA proces... 136 4e-031
gi|18379230|ref|NP_563700.1| PRP39; binding [Arabidopsis thaliana] 136 4e-031
gi|115451479|ref|NP_001049340.1| Os03g0210400 [Oryza sativa (jap... 117 2e-025
>gi|147795953|emb|CAN60862.1| hypothetical protein [Vitis vinifera]
Length = 826
Score = 169 bits (427), Expect = 5e-041
Identities = 87/127 (68%), Positives = 102/127 (80%), Gaps = 7/127 (5%)
Frame = -3
Query: 370 RLFERGLAYVGTDYLSFPLWDRYIDYEFMQQAWGQLVVIYSRILENPNQQLDRYLNSFKE 191
RLFERGLAYVGTDYLS+PLWD++I+YE+ QQ W +L +IY+RILENPNQQLDRYLNSFKE
Sbjct: 286 RLFERGLAYVGTDYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKE 345
Query: 190 LAGSRPLSELRTAEEAAAAAAAASATSEDGVQANGEDAQPDGAE----PSPAILTEAEEL 23
LAGSRPLSEL TAEEAAA A A S + G++ +A+PD E P A LT+AEEL
Sbjct: 346 LAGSRPLSELTTAEEAAATAGAFSDANGQGIEG---EARPDEVEQSSKPVSAGLTDAEEL 402
Query: 22 EKFIAIR 2
EK+IAIR
Sbjct: 403 EKYIAIR 409
>gi|157350511|emb|CAO40560.1| unnamed protein product [Vitis vinifera]
Length = 754
Score = 169 bits (427), Expect = 5e-041
Identities = 87/127 (68%), Positives = 102/127 (80%), Gaps = 7/127 (5%)
Frame = -3
Query: 370 RLFERGLAYVGTDYLSFPLWDRYIDYEFMQQAWGQLVVIYSRILENPNQQLDRYLNSFKE 191
RLFERGLAYVGTDYLS+PLWD++I+YE+ QQ W +L +IY+RILENPNQQLDRYLNSFKE
Sbjct: 187 RLFERGLAYVGTDYLSYPLWDKFIEYEYSQQEWSRLAMIYTRILENPNQQLDRYLNSFKE 246
Query: 190 LAGSRPLSELRTAEEAAAAAAAASATSEDGVQANGEDAQPDGAE----PSPAILTEAEEL 23
LAGSRPLSEL TAEEAAA A A S + G++ +A+PD E P A LT+AEEL
Sbjct: 247 LAGSRPLSELTTAEEAAATAGAFSDANGQGIEG---EARPDEVEQSSKPVSAGLTDAEEL 303
Query: 22 EKFIAIR 2
EK+IAIR
Sbjct: 304 EKYIAIR 310
>gi|3142300|gb|AAC16751.1| Contains similarity to pre-mRNA processing protein
PRP39 gb|L29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158,
gb|N38703 and gb|AA651043 come from this gene. [Arabidopsis thaliana]
Length = 1345
Score = 136 bits (341), Expect = 4e-031
Identities = 71/116 (61%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
Frame = -3
Query: 370 RLFERGLAYVGTDYLSFPLWDRYIDYEFMQQAWGQLVVIYSRILENPNQQLDRYLNSFKE 191
RLFER L YVGTD+LS PLWD+YI+YE+MQQ W ++ +IY+RILENP Q LDRY +SFKE
Sbjct: 192 RLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNLDRYFSSFKE 251
Query: 190 LAGSRPLSELRTAEEAAAAA------AAASATSEDGVQANGEDAQPDGA-EPSPAI 44
LA +RPLSELR+AEE+AAAA A+ SA SE G +A+ +Q DG+ E SP +
Sbjct: 252 LAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTEQSPKL 307
>gi|18379230|ref|NP_563700.1| PRP39; binding [Arabidopsis thaliana]
Length = 768
Score = 136 bits (341), Expect = 4e-031
Identities = 71/116 (61%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
Frame = -3
Query: 370 RLFERGLAYVGTDYLSFPLWDRYIDYEFMQQAWGQLVVIYSRILENPNQQLDRYLNSFKE 191
RLFER L YVGTD+LS PLWD+YI+YE+MQQ W ++ +IY+RILENP Q LDRY +SFKE
Sbjct: 192 RLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNLDRYFSSFKE 251
Query: 190 LAGSRPLSELRTAEEAAAAA------AAASATSEDGVQANGEDAQPDGA-EPSPAI 44
LA +RPLSELR+AEE+AAAA A+ SA SE G +A+ +Q DG+ E SP +
Sbjct: 252 LAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTEQSPKL 307
>gi|115451479|ref|NP_001049340.1| Os03g0210400 [Oryza sativa (japonica
cultivar-group)]
Length = 789
Score = 117 bits (292), Expect = 2e-025
Identities = 65/127 (51%), Positives = 82/127 (64%), Gaps = 8/127 (6%)
Frame = -3
Query: 370 RLFERGLAYVGTDYLSFPLWDRYIDYEFMQQAWGQLVVIYSRILENPNQQLDRYLNSFKE 191
RLFERGLAYVGTDY S LWD YI YE QAW L +IY+RILE+P QLDRY + KE
Sbjct: 229 RLFERGLAYVGTDYRSNILWDEYIKYEESLQAWSHLAIIYTRILEHPITQLDRYFHCLKE 288
Query: 190 LAGSRPLSELRTAEEAAAAAAAASATSEDGVQANGEDAQPD----GAEPSPAILTEAEEL 23
LA +R LSE+ T+EE AA S T+E+ Q + QP A+P + TEA+ L
Sbjct: 289 LAATRSLSEILTSEE----AAMYSVTAENTAQTLDGETQPGDVDMSAQPEISGSTEADNL 344
Query: 22 EKFIAIR 2
K++++R
Sbjct: 345 AKYVSVR 351
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,143,483,431
Number of Sequences: 7387702
Number of Extensions: 250143483431
Number of Successful Extensions: 138270154
Number of sequences better than 0.0: 0
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