BLASTX 7.6.2
Query= RU08863 /QuerySize=339
(338 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118482853|gb|ABK93341.1| unknown [Populus trichocarpa] 59 1e-007
gi|157329545|emb|CAO40656.1| unnamed protein product [Vitis vini... 57 3e-007
gi|18398287|ref|NP_565401.1| F-box family protein [Arabidopsis t... 56 5e-007
gi|6598360|gb|AAF18598.1|AC002354_6 hypothetical protein [Arabid... 56 5e-007
gi|147801030|emb|CAN66619.1| hypothetical protein [Vitis vinifera] 55 2e-006
>gi|118482853|gb|ABK93341.1| unknown [Populus trichocarpa]
Length = 392
Score = 59 bits (140), Expect = 1e-007
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1
Query: 176 QWCDLPKELWQMIGKFLETRVDVLRFRSVCSLWRSAVRP 60
QW DLPKEL +MI K L+ RV+VLRFR+VCS WR +V P
Sbjct: 3 QWADLPKELLEMISKRLDLRVEVLRFRAVCSSWRCSVSP 41
>gi|157329545|emb|CAO40656.1| unnamed protein product [Vitis vinifera]
Length = 447
Score = 57 bits (136), Expect = 3e-007
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = -1
Query: 206 SKINMQRPKL-----QWCDLPKELWQMIGKFLETRVDVLRFRSVCSLWRSAVRPLDPIDS 42
SK+ R K+ QW LPK+L I L+TR+D LRFR VCS W S+V P P +
Sbjct: 38 SKVCKARQKMESDTGQWSHLPKDLLAKIAGRLDTRIDFLRFRGVCSSWMSSVSPTFPSKN 97
Query: 41 PPLPLGFPH 15
P L L P+
Sbjct: 98 PLLSLKIPY 106
>gi|18398287|ref|NP_565401.1| F-box family protein [Arabidopsis thaliana]
Length = 407
Score = 56 bits (134), Expect = 5e-007
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -1
Query: 179 LQWCDLPKELWQMIGKFLETRVDVLRFRSVCSLWRSAVRPLDPIDSPPLPL 27
+ W LPK+L +I K LE+ D+++FRSVCS WRSA P P+ + LP+
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPI 52
>gi|6598360|gb|AAF18598.1|AC002354_6 hypothetical protein [Arabidopsis
thaliana]
Length = 1169
Score = 56 bits (134), Expect = 5e-007
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -1
Query: 179 LQWCDLPKELWQMIGKFLETRVDVLRFRSVCSLWRSAVRPLDPIDSPPLPL 27
+ W LPK+L +I K LE+ D+++FRSVCS WRSA P P+ + LP+
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPI 52
>gi|147801030|emb|CAN66619.1| hypothetical protein [Vitis vinifera]
Length = 986
Score = 55 bits (130), Expect = 2e-006
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = -1
Query: 206 SKINMQRPKL-----QWCDLPKELWQMIGKFLETRVDVLRFRSVCSLWRSAVRPLDPIDS 42
SK+ R K+ QW LPK+L I L+T +D LRFR VCS W S+V P P +
Sbjct: 382 SKVCKARQKMESDXGQWSHLPKDLLAKIAGRLDTXIDFLRFRGVCSSWMSSVSPTFPSKN 441
Query: 41 PPLPLGFPH 15
P L L P+
Sbjct: 442 PLLSLKIPY 450
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,757,972,787
Number of Sequences: 7387702
Number of Extensions: 256757972787
Number of Successful Extensions: 146551980
Number of sequences better than 0.0: 0
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