BLASTX 7.6.2
Query= RU09088 /QuerySize=416
(415 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|3334320|sp|O22518|RSSA_SOYBN 40S ribosomal protein SA (p40) 208 1e-052
gi|118481301|gb|ABK92594.1| unknown [Populus trichocarpa] 200 2e-050
gi|147782664|emb|CAN61790.1| hypothetical protein [Vitis vinifera] 198 1e-049
gi|157339890|emb|CAO45567.1| unnamed protein product [Vitis vini... 198 1e-049
gi|118484199|gb|ABK93980.1| unknown [Populus trichocarpa] 198 1e-049
>gi|3334320|sp|O22518|RSSA_SOYBN 40S ribosomal protein SA (p40)
Length = 310
Score = 208 bits (527), Expect = 1e-052
Identities = 104/113 (92%), Positives = 109/113 (96%), Gaps = 3/113 (2%)
Frame = -3
Query: 332 MATTT---AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 162
MAT T AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGK
Sbjct: 1 MATATNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGK 60
Query: 161 TWEKLQLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
TWEKLQLAARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Sbjct: 61 TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG 113
>gi|118481301|gb|ABK92594.1| unknown [Populus trichocarpa]
Length = 312
Score = 200 bits (508), Expect = 2e-050
Identities = 99/109 (90%), Positives = 104/109 (95%)
Frame = -3
Query: 329 ATTTAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 150
A T APPR+LSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 7 AGATPAPPRELSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 66
Query: 149 LQLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
L LAARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TGA+ IAGRHTPG
Sbjct: 67 LLLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPG 115
>gi|147782664|emb|CAN61790.1| hypothetical protein [Vitis vinifera]
Length = 312
Score = 198 bits (502), Expect = 1e-049
Identities = 98/105 (93%), Positives = 101/105 (96%)
Frame = -3
Query: 317 AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 138
A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2 ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61
Query: 137 ARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
ARVIVAIENPKDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Sbjct: 62 ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG 106
>gi|157339890|emb|CAO45567.1| unnamed protein product [Vitis vinifera]
Length = 274
Score = 198 bits (502), Expect = 1e-049
Identities = 98/105 (93%), Positives = 101/105 (96%)
Frame = -3
Query: 317 AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 138
A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2 ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61
Query: 137 ARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
ARVIVAIENPKDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Sbjct: 62 ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG 106
>gi|118484199|gb|ABK93980.1| unknown [Populus trichocarpa]
Length = 316
Score = 198 bits (501), Expect = 1e-049
Identities = 101/114 (88%), Positives = 105/114 (92%), Gaps = 4/114 (3%)
Frame = -3
Query: 332 MATTT----AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLG 165
MAT T AAP R LSQKE DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLG
Sbjct: 1 MATATGAAAAAPTRALSQKELDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLG 60
Query: 164 KTWEKLQLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
KTWEKL LAARVIVAIENP+D+IVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Sbjct: 61 KTWEKLLLAARVIVAIENPQDMIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG 114
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,757,972,787
Number of Sequences: 7387702
Number of Extensions: 256757972787
Number of Successful Extensions: 146551980
Number of sequences better than 0.0: 0
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