BLASTX 7.6.2
Query= RU09203 /QuerySize=780
(779 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|134093195|ref|YP_001109497.1| hypothetical protein Poptr_cp01... 148 6e-034
gi|22257620|sp|Q9MTN4|YCX4_OENHO Uncharacterized 8.4 kDa protein... 137 1e-030
gi|7484687|pir||T08999 hypothetical protein - spinach chloroplast 125 4e-027
gi|1022811|gb|AAA79707.1| ORF 62 123 2e-026
gi|57791491|gb|AAW56530.1| PsbZ [Prunus hortulana] 121 1e-025
>gi|134093195|ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus
trichocarpa]
Length = 113
Score = 148 bits (372), Expect = 6e-034
Identities = 76/90 (84%), Positives = 79/90 (87%), Gaps = 3/90 (3%)
Frame = -1
Query: 311 GSFHFWI*NE*VQEMRELRIPTRKTNPIHNDVPENTTFLLPDQPSGEANTTGTLINKINE 132
G FHF I VQEMRELRIPTRKTNPIHNDVPENTTFLL DQPSGE TTGTLINKI+E
Sbjct: 12 GLFHFCI---WVQEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEKTTGTLINKIDE 68
Query: 131 VAINAKTANWKAIVMFLILQSTNKRIMPLD 42
VAINAKTANWKAIVMFLILQ+TNKR +P D
Sbjct: 69 VAINAKTANWKAIVMFLILQATNKRTIPFD 98
>gi|22257620|sp|Q9MTN4|YCX4_OENHO Uncharacterized 8.4 kDa protein in ycf9-trnS
intergenic region (ORF75)
Length = 75
Score = 137 bits (343), Expect = 1e-030
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = -1
Query: 269 MRELRIPTRKTNPIHNDVPENTTFLLPDQPSGEANTTGTLINKINEVAINAKTANWKAIV 90
MRELRIPTRKTNPIHNDVPENTTFLL DQPSGEANTTGTLI+K +EVAINAKTANWKAIV
Sbjct: 1 MRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEANTTGTLISKSDEVAINAKTANWKAIV 60
Query: 89 MFLILQSTNKRIMP 48
M LILQ+TNKRI+P
Sbjct: 61 MLLILQATNKRIIP 74
>gi|7484687|pir||T08999 hypothetical protein - spinach chloroplast
Length = 90
Score = 125 bits (313), Expect = 4e-027
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = -1
Query: 269 MRELRIPTRKTNPIHNDVPENTTFLLPDQPSGEANTTGTLINKINEVAINAKTANWKAIV 90
MRELRIPTRKTNP HNDVPENT FLL DQPSGEANTTGTLI+KI+EVAINAKTANWKAIV
Sbjct: 1 MRELRIPTRKTNPSHNDVPENTIFLLLDQPSGEANTTGTLISKIDEVAINAKTANWKAIV 60
Query: 89 MFLILQSTNKRIMPLD 42
+ +ILQ+ K+ +P D
Sbjct: 61 IRIILQAIKKQTIPFD 76
>gi|1022811|gb|AAA79707.1| ORF 62
Length = 70
Score = 123 bits (308), Expect = 2e-026
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 64 LVDWRIRNMTIAFQLAVFALIATSLILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVF 243
+V WRIRNMTIAFQLAVFALIATS +L+ISVP+VFASP+GWS NKNVVFSGTSLWIGLVF
Sbjct: 1 MVAWRIRNMTIAFQLAVFALIATSSVLVISVPLVFASPDGWSNNKNVVFSGTSLWIGLVF 60
Query: 244 LVGILNSLIS 273
LV ILNSLIS
Sbjct: 61 LVAILNSLIS 70
>gi|57791491|gb|AAW56530.1| PsbZ [Prunus hortulana]
Length = 62
Score = 121 bits (301), Expect = 1e-025
Identities = 62/62 (100%)
Frame = +1
Query: 88 MTIAFQLAVFALIATSLILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 267
MTIAFQLAVFALIATSLILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1 MTIAFQLAVFALIATSLILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
Query: 268 IS 273
IS
Sbjct: 61 IS 62
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263,158,408,635
Number of Sequences: 7387702
Number of Extensions: 263158408635
Number of Successful Extensions: 154599443
Number of sequences better than 0.0: 0
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