BLASTX 7.6.2
Query= RU09336 /QuerySize=366
(365 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157356298|emb|CAO62450.1| unnamed protein product [Vitis vini... 184 2e-045
gi|18410540|ref|NP_565080.1| mitochondrial transcription termina... 170 3e-041
gi|110735984|dbj|BAE99966.1| hypothetical protein [Arabidopsis t... 170 3e-041
gi|12325131|gb|AAG52507.1|AC016662_1 unknown protein, 5' partial... 150 3e-035
>gi|157356298|emb|CAO62450.1| unnamed protein product [Vitis vinifera]
Length = 451
Score = 184 bits (465), Expect = 2e-045
Identities = 87/120 (72%), Positives = 100/120 (83%)
Frame = -3
Query: 363 DRLKPLLCEFKDFGFGKDVIRREIVKEPRVLGMEFGEFSWCLEWLRTLKCREPIKEKIFS 184
DRL+PLL EF GF +DV+RREI +EPR+LGME GE S CLE + TLKCR PIKEKIF
Sbjct: 223 DRLEPLLDEFGKLGFSEDVVRREISREPRMLGMELGEMSRCLELVGTLKCRVPIKEKIFR 282
Query: 183 NGEFRAGFEVKLRVDCLCKHGLIRREAFEVLWKEPRSIIYKVEDIERKIEFLTHEMKFNI 4
G RAGFEVKLRVDCLC++GLIRREAFEVLWKEPR IIY++EDIE KIEFL H M++N+
Sbjct: 283 EGALRAGFEVKLRVDCLCRYGLIRREAFEVLWKEPRVIIYEIEDIEEKIEFLVHRMRYNV 342
>gi|18410540|ref|NP_565080.1| mitochondrial transcription termination
factor-related / mTERF-related [Arabidopsis thaliana]
Length = 445
Score = 170 bits (429), Expect = 3e-041
Identities = 80/119 (67%), Positives = 97/119 (81%)
Frame = -3
Query: 360 RLKPLLCEFKDFGFGKDVIRREIVKEPRVLGMEFGEFSWCLEWLRTLKCREPIKEKIFSN 181
RLKPLL EF GF KD +++EI +EPRVLG+E GE CLE + TLKCRE I+ I S
Sbjct: 217 RLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKCREVIRVSIISE 276
Query: 180 GEFRAGFEVKLRVDCLCKHGLIRREAFEVLWKEPRSIIYKVEDIERKIEFLTHEMKFNI 4
G FRAGFEVKLRVDCLCK+GLIRR+AF+V+WKEPR I+Y++EDIE+KIEFLT+ M F+I
Sbjct: 277 GAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHI 335
>gi|110735984|dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana]
Length = 248
Score = 170 bits (429), Expect = 3e-041
Identities = 80/119 (67%), Positives = 97/119 (81%)
Frame = -3
Query: 360 RLKPLLCEFKDFGFGKDVIRREIVKEPRVLGMEFGEFSWCLEWLRTLKCREPIKEKIFSN 181
RLKPLL EF GF KD +++EI +EPRVLG+E GE CLE + TLKCRE I+ I S
Sbjct: 20 RLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKCREVIRVSIISE 79
Query: 180 GEFRAGFEVKLRVDCLCKHGLIRREAFEVLWKEPRSIIYKVEDIERKIEFLTHEMKFNI 4
G FRAGFEVKLRVDCLCK+GLIRR+AF+V+WKEPR I+Y++EDIE+KIEFLT+ M F+I
Sbjct: 80 GAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHI 138
>gi|12325131|gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255
[Arabidopsis thaliana]
Length = 404
Score = 150 bits (377), Expect = 3e-035
Identities = 74/119 (62%), Positives = 91/119 (76%), Gaps = 2/119 (1%)
Frame = -3
Query: 360 RLKPLLCEFKDFGFGKDVIRREIVKEPRVLGMEFGEFSWCLEWLRTLKCREPIKEKIFSN 181
RLKPLL EF GF KD +++EI +E L + E CLE + TLKCRE I+ I S
Sbjct: 178 RLKPLLDEFMKMGFSKDDVKKEIAREREFL--VWSELPRCLELINTLKCREVIRVSIISE 235
Query: 180 GEFRAGFEVKLRVDCLCKHGLIRREAFEVLWKEPRSIIYKVEDIERKIEFLTHEMKFNI 4
G FRAGFEVKLRVDCLCK+GLIRR+AF+V+WKEPR I+Y++EDIE+KIEFLT+ M F+I
Sbjct: 236 GAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHI 294
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263,158,408,635
Number of Sequences: 7387702
Number of Extensions: 263158408635
Number of Successful Extensions: 154599443
Number of sequences better than 0.0: 0
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