BLASTX 7.6.2
Query= RU09379 /QuerySize=765
(764 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118481200|gb|ABK92551.1| unknown [Populus trichocarpa] 131 1e-028
gi|157357151|emb|CAO63645.1| unnamed protein product [Vitis vini... 121 1e-025
gi|132424657|gb|ABO33481.1| class II KNOX homeobox transcription... 114 7e-024
gi|1170191|sp|P46606|HD1_BRANA Homeobox protein HD1 109 2e-022
gi|21618231|gb|AAM67281.1| homeodomain-containing protein HD1, p... 100 1e-019
>gi|118481200|gb|ABK92551.1| unknown [Populus trichocarpa]
Length = 301
Score = 131 bits (327), Expect = 1e-028
Identities = 67/89 (75%), Positives = 70/89 (78%), Gaps = 6/89 (6%)
Frame = +1
Query: 496 MQDSGLGMMGSGGGGGLSGGGGG------GDDHTHQLKSEIATHPLYEQLLSAHVSCLRV 657
MQ+ LGMMGSG GG L G G D + QLK+EIATHPLYEQLLSAHVSCLRV
Sbjct: 1 MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV 60
Query: 658 ATPIDQLPLIDAQLSQSHHLLRSYASHHN 744
ATPIDQLPLIDAQLSQSHHLLRSYAS HN
Sbjct: 61 ATPIDQLPLIDAQLSQSHHLLRSYASQHN 89
>gi|157357151|emb|CAO63645.1| unnamed protein product [Vitis vinifera]
Length = 291
Score = 121 bits (301), Expect = 1e-025
Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 6/85 (7%)
Frame = +1
Query: 508 GLGMMGSGGGGGLSGGGGGGDDHTHQLKSEIATHPLYEQLLSAHVSCLRVATPIDQLPLI 687
GLGMMG GG GGLS GD QLK EI THPLYEQLL+AHV+CLRVATPIDQLPLI
Sbjct: 5 GLGMMGGGGIGGLS----DGDQQQRQLKGEIVTHPLYEQLLAAHVACLRVATPIDQLPLI 60
Query: 688 DAQLSQSHHLLRSYAS--HHNSTAI 756
DAQL+QSHHLLRSYAS HH+ ++
Sbjct: 61 DAQLTQSHHLLRSYASQQHHHGNSL 85
>gi|132424657|gb|ABO33481.1| class II KNOX homeobox transcription factor
[Medicago truncatula]
Length = 292
Score = 114 bits (285), Expect = 7e-024
Identities = 60/75 (80%), Positives = 62/75 (82%), Gaps = 4/75 (5%)
Frame = +1
Query: 511 LGMMGSGGGGGLSGGGGGGDDHTHQLKSEIATHPLYEQLLSAHVSCLRVATPIDQLPLID 690
LGMM G GGG G GGG QLK+EIATHPLYEQLLSAHV+CLRVATPIDQLPLID
Sbjct: 6 LGMM-QGSGGGYGGDGGG---ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLID 61
Query: 691 AQLSQSHHLLRSYAS 735
AQLSQSHHLLRSY S
Sbjct: 62 AQLSQSHHLLRSYIS 76
>gi|1170191|sp|P46606|HD1_BRANA Homeobox protein HD1
Length = 294
Score = 109 bits (272), Expect = 2e-022
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +1
Query: 496 MQDSGLGMMGSGGGGGLSGGGGGGDDHTHQLKSEIATHPLYEQLLSAHVSCLRVATPIDQ 675
MQ++ LGM+G+ GGG G + Q+K EIATHP+Y+QLL+AHV+CLRVATPIDQ
Sbjct: 1 MQEAALGMIGATVGGGGDGDAAVVAEQNRQMKGEIATHPMYDQLLAAHVACLRVATPIDQ 60
Query: 676 LPLIDAQLSQSHHLLRSYAS 735
LP+I+AQLS SHHLLRSYAS
Sbjct: 61 LPIIEAQLSHSHHLLRSYAS 80
>gi|21618231|gb|AAM67281.1| homeodomain-containing protein HD1, putative
[Arabidopsis thaliana]
Length = 283
Score = 100 bits (248), Expect = 1e-019
Identities = 51/73 (69%), Positives = 58/73 (79%), Gaps = 10/73 (13%)
Frame = +1
Query: 556 GGGGD-----DHTHQLKSEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLL 720
GG GD + QLK EIATHP+YEQLL+AHV+CLRVATPIDQLP+I+AQLSQSHHLL
Sbjct: 6 GGDGDAAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 65
Query: 721 RSYAS-----HHN 744
RSYAS HH+
Sbjct: 66 RSYASTAVGYHHD 78
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263,158,408,635
Number of Sequences: 7387702
Number of Extensions: 263158408635
Number of Successful Extensions: 154599443
Number of sequences better than 0.0: 0
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