BLASTX 7.6.2
Query= RU10627 /QuerySize=899
(898 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15235621|ref|NP_193054.1| short-chain dehydrogenase/reductase... 364 9e-099
gi|77403673|dbj|BAE46415.1| short chain dehydrogenase [Solanum t... 327 7e-088
gi|157348601|emb|CAO23493.1| unnamed protein product [Vitis vini... 321 5e-086
gi|15229203|ref|NP_187048.1| short-chain dehydrogenase/reductase... 314 1e-083
gi|9758903|dbj|BAB09479.1| Brn1-like protein [Arabidopsis thaliana] 312 3e-083
>gi|15235621|ref|NP_193054.1| short-chain dehydrogenase/reductase (SDR) family
protein [Arabidopsis thaliana]
Length = 263
Score = 364 bits (932), Expect = 9e-099
Identities = 172/255 (67%), Positives = 216/255 (84%), Gaps = 4/255 (1%)
Frame = +3
Query: 21 LNGRVAIVTGGSRGIGREIAVHLHSLGARLVINYASSSKQADELASHLNNNNNNKSSQLA 200
L GRVAIVTG +RG+GREIA+HLHSLGAR+ INY SSS +A+ L S LN+++ KS
Sbjct: 13 LAGRVAIVTGATRGMGREIAIHLHSLGARVTINYVSSSSKAELLVSELNDSSQLKS---- 68
Query: 201 AIAVKADVSDPDQVKLLFDKAEQELGAQVHILVNCAGVLDPKYPSLADTCVQDWDNIFNV 380
AIAVKADVSDPDQ+ LFD+ EQE G++VHI+VNCAGVLDPKYPSL++T ++D+DN F +
Sbjct: 69 AIAVKADVSDPDQINNLFDQTEQEFGSKVHIVVNCAGVLDPKYPSLSETTLEDFDNTFTI 128
Query: 381 NTKGAFLACREAANRLPRGAGGRIIMITTSLVGGLMPGYAAYTASKAAVETMTKIVAKEL 560
NT+G+FL C+EAA R+ RG GGRIIM++TS+VGGL PGY Y ASKAAVETM K++AKEL
Sbjct: 129 NTRGSFLCCKEAAKRVMRGGGGRIIMMSTSMVGGLAPGYGVYAASKAAVETMVKVLAKEL 188
Query: 561 KGTGITANCVAPGPVATDLFFAGKSEETINRIKDACPLGRLGQPHDVSQVVGFLAGDAGE 740
KG+ ITANCVAPGPVAT++F+AGKS+ET+ + ACP+GR+G+ D++++VGFLAGD GE
Sbjct: 189 KGSRITANCVAPGPVATEMFYAGKSDETVKMLAGACPMGRIGESKDITEIVGFLAGDGGE 248
Query: 741 WINGQVIRVNGGFVI 785
WINGQVIR NGGFV+
Sbjct: 249 WINGQVIRANGGFVV 263
>gi|77403673|dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]
Length = 261
Score = 327 bits (838), Expect = 7e-088
Identities = 160/256 (62%), Positives = 199/256 (77%), Gaps = 4/256 (1%)
Frame = +3
Query: 15 QNLNGRVAIVTGGSRGIGREIAVHLHSLGARLVINYASSSKQADELASHLNNNNNNKSSQ 194
QNL RVAIVTG SRGIG+ IA+HL SLGA+LVINY S+S QAD++ S +N+ +++
Sbjct: 10 QNLGNRVAIVTGSSRGIGKAIALHLASLGAKLVINYTSNSTQADDVVSQINSTSDSP--- 66
Query: 195 LAAIAVKADVSDPDQVKLLFDKAEQELGAQVHILVNCAGVLDPKYPSLADTCVQDWDNIF 374
AIAVKA+VSDPDQVK LFD AE + V+ILVNCAGVLD KYPS+ +T ++D+D F
Sbjct: 67 -RAIAVKANVSDPDQVKSLFDAAESAFQSPVNILVNCAGVLDGKYPSILNTPLEDFDRTF 125
Query: 375 NVNTKGAFLACREAANRLPRGAGGRIIMITTSLVGGLMPGYAAYTASKAAVETMTKIVAK 554
VN +GAF+ C+E ANR+ RG GGRII +++S+ L PG+ AY ASKAAVE M KI+AK
Sbjct: 126 GVNVRGAFICCKEGANRIQRGGGGRIICLSSSMAVALRPGFGAYAASKAAVEAMVKILAK 185
Query: 555 ELKGTGITANCVAPGPVATDLFFAGKSEETINRIKDACPLGRLGQPHDVSQVVGFLAGDA 734
ELKGTGIT NC APGP+ATD+F+ GK+EE I + D CP GRLG P DV+ VVGFLAGD
Sbjct: 186 ELKGTGITVNCAAPGPIATDMFYEGKTEEMIKKAIDECPHGRLGLPEDVAPVVGFLAGDT 245
Query: 735 GEWINGQVIRVNGGFV 782
EW+NGQ+IRVNGG++
Sbjct: 246 SEWVNGQIIRVNGGYI 261
>gi|157348601|emb|CAO23493.1| unnamed protein product [Vitis vinifera]
Length = 248
Score = 321 bits (822), Expect = 5e-086
Identities = 153/212 (72%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
Frame = +3
Query: 150 LASHLNNNNNNKSSQLAAIAVKADVSDPDQVKLLFDKAEQELGAQVHILVNCAGVLDPKY 329
L + L N+ ++ SS AIAV+A+VSDPDQVK+LFD+A+QE G+ +HILVNCAGVLDPKY
Sbjct: 38 LGARLLNSPDSSSSHPVAIAVQANVSDPDQVKMLFDRAQQEFGS-IHILVNCAGVLDPKY 96
Query: 330 PSLADTCVQDWDNIFNVNTKGAFLACREAANRLPRGAGGRIIMITTSLVGGLMPGYAAYT 509
PSLA+T V+DWDN F++NT+G+FL CREAANRL RG GGRII+ITTS V L PGYAAY
Sbjct: 97 PSLANTTVEDWDNTFSINTRGSFLVCREAANRLIRGGGGRIILITTSAVAALTPGYAAYA 156
Query: 510 ASKAAVETMTKIVAKELKGTGITANCVAPGPVATDLFFAGKSEETINRIKDACPLGRLGQ 689
ASKAAVETMTKI+AKELKGT +TANCVAPGP+AT++FF GKSEE I R+ DACP+GRLG+
Sbjct: 157 ASKAAVETMTKILAKELKGTSVTANCVAPGPIATEMFFEGKSEELIKRLVDACPMGRLGE 216
Query: 690 PHDVSQVVGFLAGDAGEWINGQVIRVNGGFVI 785
P DV+Q+VGFLA DAGEWINGQ+IR+NGGF +
Sbjct: 217 PKDVTQLVGFLATDAGEWINGQIIRINGGFAV 248
>gi|15229203|ref|NP_187048.1| short-chain dehydrogenase/reductase (SDR) family
protein [Arabidopsis thaliana]
Length = 270
Score = 314 bits (802), Expect = 1e-083
Identities = 157/257 (61%), Positives = 194/257 (75%), Gaps = 3/257 (1%)
Frame = +3
Query: 21 LNGRVAIVTGGSRGIGREIAVHLHSLGARLVINYASSSKQADELASHLNN---NNNNKSS 191
L GRVAIVTG SRGIGR IA+HL LGAR+VINY S + A+ +AS +N+
Sbjct: 14 LAGRVAIVTGSSRGIGRAIAIHLAELGARIVINYTSKAADAERVASEINDFPVREEITGK 73
Query: 192 QLAAIAVKADVSDPDQVKLLFDKAEQELGAQVHILVNCAGVLDPKYPSLADTCVQDWDNI 371
AI V+A+VS+P QVK +FD AE A VHILVN AG+LDPKYP++ADT V+D+D+
Sbjct: 74 GPRAIVVQANVSEPSQVKSMFDAAESAFEAPVHILVNSAGILDPKYPTIADTSVEDFDHT 133
Query: 372 FNVNTKGAFLACREAANRLPRGAGGRIIMITTSLVGGLMPGYAAYTASKAAVETMTKIVA 551
F+VNTKGAFL +EAANRL +G GGRII++T+S L PG+ AY ASKAAVETM KI+A
Sbjct: 134 FSVNTKGAFLCSKEAANRLKQGGGGRIILLTSSQTRSLKPGFGAYAASKAAVETMVKILA 193
Query: 552 KELKGTGITANCVAPGPVATDLFFAGKSEETINRIKDACPLGRLGQPHDVSQVVGFLAGD 731
KELKGTGITANCVAPGP+AT++FF GK+ E + +I P GR+G+ DV +VGFLAGD
Sbjct: 194 KELKGTGITANCVAPGPIATEMFFDGKTPELVEKIAAESPFGRVGEAKDVVPLVGFLAGD 253
Query: 732 AGEWINGQVIRVNGGFV 782
GEW+NGQ+I VNGG+V
Sbjct: 254 GGEWVNGQIIPVNGGYV 270
>gi|9758903|dbj|BAB09479.1| Brn1-like protein [Arabidopsis thaliana]
Length = 261
Score = 312 bits (798), Expect = 3e-083
Identities = 151/258 (58%), Positives = 198/258 (76%), Gaps = 1/258 (0%)
Frame = +3
Query: 9 ATQNLNGRVAIVTGGSRGIGREIAVHLHSLGARLVINYASSSKQADELASHLNNNNNNKS 188
+ +L GRVAIVTG SRGIGR IA+HL LGA++VINY + S +AD++A+ +N++
Sbjct: 4 SVSSLAGRVAIVTGSSRGIGRAIAIHLAELGAKIVINYTTRSTEADQVAAEINSSAGTVP 63
Query: 189 SQLAAIAVKADVSDPDQVKLLFDKAEQELGAQVHILVNCAGVLDPKYPSLADTCVQDWDN 368
+A + + AD+S+P Q+K LFD AE+ + VHILVN AG+L+P YP++A+T ++++D
Sbjct: 64 QPIAVVFL-ADISEPSQIKSLFDAAEKAFNSPVHILVNSAGILNPNYPTIANTPIEEFDR 122
Query: 369 IFNVNTKGAFLACREAANRLPRGAGGRIIMITTSLVGGLMPGYAAYTASKAAVETMTKIV 548
IF VNT+G+FL C+EAA RL RG GGRII++T+SL L+PG AYTASKAAVE M KI+
Sbjct: 123 IFKVNTRGSFLCCKEAAKRLKRGGGGRIILLTSSLTEALIPGQGAYTASKAAVEAMVKIL 182
Query: 549 AKELKGTGITANCVAPGPVATDLFFAGKSEETINRIKDACPLGRLGQPHDVSQVVGFLAG 728
AKELKG GITANCV+PGPVAT++FF GKSEET+ I + P GRLG+ D++ VVGFLA
Sbjct: 183 AKELKGLGITANCVSPGPVATEMFFDGKSEETVMNIIERSPFGRLGETKDIASVVGFLAS 242
Query: 729 DAGEWINGQVIRVNGGFV 782
D GEWINGQVI NG F+
Sbjct: 243 DGGEWINGQVIVANGAFL 260
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,939,573,105
Number of Sequences: 7387702
Number of Extensions: 301939573105
Number of Successful Extensions: 164633019
Number of sequences better than 0.0: 0
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