BLASTX 7.6.2
Query= RU10920 /QuerySize=258
(257 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|150003574|ref|YP_001298318.1| two-component system sensor his... 173 6e-042
gi|212692221|ref|ZP_03300349.1| hypothetical protein BACDOR_0171... 170 3e-041
gi|189466394|ref|ZP_03015179.1| hypothetical protein BACINT_0276... 95 1e-018
gi|29345776|ref|NP_809279.1| two-component system sensor histidi... 89 8e-017
gi|198274494|ref|ZP_03207026.1| hypothetical protein BACPLE_0064... 87 2e-016
>gi|150003574|ref|YP_001298318.1| two-component system sensor histidine
kinase/response regulator, hybrid [Bacteroides vulgatus ATCC 8482]
Length = 1408
Score = 173 bits (436), Expect = 6e-042
Identities = 84/85 (98%)
Frame = +2
Query: 2 FTKLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG 181
F KLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG
Sbjct: 969 FAKLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG 1028
Query: 182 QITIYATPFRQEEQEKLFICIRDTG 256
QITIYATPFRQEEQEKLFICIRDTG
Sbjct: 1029 QITIYATPFRQEEQEKLFICIRDTG 1053
>gi|212692221|ref|ZP_03300349.1| hypothetical protein BACDOR_01717 [Bacteroides
dorei DSM 17855]
Length = 1408
Score = 170 bits (430), Expect = 3e-041
Identities = 83/85 (97%)
Frame = +2
Query: 2 FTKLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG 181
F KLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG
Sbjct: 969 FAKLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG 1028
Query: 182 QITIYATPFRQEEQEKLFICIRDTG 256
QITIYATP RQEEQEKLFICIRDTG
Sbjct: 1029 QITIYATPLRQEEQEKLFICIRDTG 1053
>gi|189466394|ref|ZP_03015179.1| hypothetical protein BACINT_02769 [Bacteroides
intestinalis DSM 17393]
Length = 1404
Score = 95 bits (235), Expect = 1e-018
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 FTKLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG 181
F ++ LL PF+ +A ER I+I+ F + S EI +DE+AMHKVI NL+ NA+KFTP GG
Sbjct: 963 FVSFIHSLLTPFEVFAGERNISIKHYFHMKSSEIFFDEEAMHKVITNLLSNAIKFTPDGG 1022
Query: 182 QITIY--ATPFRQEEQEKLFICIRDT 253
I+IY P + +++EKL++C+ DT
Sbjct: 1023 SISIYIATLPAKDDKEEKLYLCVSDT 1048
>gi|29345776|ref|NP_809279.1| two-component system sensor histidine
kinase/response regulator, hybrid ('one component system') [Bacteroides
thetaiotaomicron VPI-5482]
Length = 1420
Score = 89 bits (219), Expect = 8e-017
Identities = 37/86 (43%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 FTKLLNELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGG 181
F K ++ L+ PF+ +A ER I ++R +R+ EI+YDE+AM KV+ NL+ NA+KFTP GG
Sbjct: 978 FLKFIDSLITPFEVFAQERNIVLKRYYRMEMPEILYDEEAMRKVVTNLLSNAIKFTPNGG 1037
Query: 182 QITIYATPF--RQEEQEKLFICIRDT 253
+++Y + + E+E L+IC++D+
Sbjct: 1038 TVSLYLSALFAKDSEKETLYICVKDS 1063
>gi|198274494|ref|ZP_03207026.1| hypothetical protein BACPLE_00642 [Bacteroides
plebeius DSM 17135]
Length = 1398
Score = 87 bits (215), Expect = 2e-016
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +2
Query: 20 ELLVPFDAYASERGITIERRFRLPSCEIMYDEDAMHKVIVNLIGNALKFTPKGGQITIYA 199
E++ PF YA RGI ++ RLP +M+DED M K++ NLI NALKFTPKGG + IY
Sbjct: 973 EIVPPFADYAKNRGINLQLYLRLPDPFLMFDEDVMRKIMTNLISNALKFTPKGGNVGIYV 1032
Query: 200 TPFRQEEQEKLFICIRDTG 256
Q ++KLFI +RDTG
Sbjct: 1033 GVIGQATEKKLFISVRDTG 1051
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,939,573,105
Number of Sequences: 7387702
Number of Extensions: 301939573105
Number of Successful Extensions: 164633019
Number of sequences better than 0.0: 0
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