BLASTX 7.6.2
Query= RU11048 /QuerySize=305
(304 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15242365|ref|NP_196487.1| KIWI; DNA binding / transcription c... 118 1e-025
gi|186521475|ref|NP_001119194.1| KIWI [Arabidopsis thaliana] 115 1e-024
gi|147846591|emb|CAN79502.1| hypothetical protein [Vitis vinifera] 113 4e-024
gi|116782200|gb|ABK22407.1| unknown [Picea sitchensis] 97 2e-019
gi|115446667|ref|NP_001047113.1| Os02g0553600 [Oryza sativa (jap... 82 1e-014
>gi|15242365|ref|NP_196487.1| KIWI; DNA binding / transcription coactivator
[Arabidopsis thaliana]
Length = 107
Score = 118 bits (295), Expect = 1e-025
Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -1
Query: 247 RGKRKEQEGHASDGDSEGHAPPKKTAKRDSDDDDDSAEDIVVCEISKNRRVTVRNWNGKV 68
RGKRK+++ ASD +SE HAP KK AK DD D ++DIVVC ISKNRRV+VRNWNGK+
Sbjct: 4 RGKRKDEDVRASDDESETHAPAKKVAK--PADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61
Query: 67 IVDIREFYVKEGKQLPGKKGIS 2
+DIREFYVK+GK LPGKKGIS
Sbjct: 62 WIDIREFYVKDGKTLPGKKGIS 83
>gi|186521475|ref|NP_001119194.1| KIWI [Arabidopsis thaliana]
Length = 85
Score = 115 bits (287), Expect = 1e-024
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -1
Query: 247 RGKRKEQEGHASDGDSEGHAPPKKTAKRDSDDDDDSAEDIVVCEISKNRRVTVRNWNGKV 68
RGKRK+++ ASD +SE HAP KK AK DD D ++DIVVC ISKNRRV+VRNWNGK+
Sbjct: 4 RGKRKDEDVRASDDESETHAPAKKVAK--PADDSDQSDDIVVCNISKNRRVSVRNWNGKI 61
Query: 67 IVDIREFYVKEGKQLPGKKG 8
+DIREFYVK+GK LPGKKG
Sbjct: 62 WIDIREFYVKDGKTLPGKKG 81
>gi|147846591|emb|CAN79502.1| hypothetical protein [Vitis vinifera]
Length = 103
Score = 113 bits (282), Expect = 4e-024
Identities = 53/78 (67%), Positives = 66/78 (84%), Gaps = 4/78 (5%)
Frame = -1
Query: 235 KEQEGHASDGDSEGHAPPKKTAKRDSDDDDDSAEDIVVCEISKNRRVTVRNWNGKVIVDI 56
K ++ +ASDGDS+ HAP KK++ +DSDD D +I+VCEIS+NRRV+VRNW GKV VDI
Sbjct: 6 KRKQSYASDGDSDDHAPSKKSSMKDSDDPD----NIIVCEISRNRRVSVRNWQGKVQVDI 61
Query: 55 REFYVKEGKQLPGKKGIS 2
REFYVK+GKQ+PGKKGIS
Sbjct: 62 REFYVKDGKQMPGKKGIS 79
>gi|116782200|gb|ABK22407.1| unknown [Picea sitchensis]
Length = 104
Score = 97 bits (241), Expect = 2e-019
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = -1
Query: 244 GKRKEQEGHASDGDSEGHAPPKKTAKRDSDDDDDSAEDIVVCEISKNRRVTVRNWNGKVI 65
GKRKE+ D D +G +P KK K+ DD S I +CEISK R+V+VR W GK+
Sbjct: 5 GKRKEEYDRDDDSDGDGESPVKKKTKKKFVSDDTST--IEICEISKTRKVSVRMWQGKIF 62
Query: 64 VDIREFYVKEGKQLPGKKGIS 2
VDIREFY+K+GKQLPGKKGIS
Sbjct: 63 VDIREFYIKDGKQLPGKKGIS 83
>gi|115446667|ref|NP_001047113.1| Os02g0553600 [Oryza sativa (japonica
cultivar-group)]
Length = 101
Score = 82 bits (200), Expect = 1e-014
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = -1
Query: 196 GHAPPKKTAKRDSDDDDDSAEDIVVCEISKNRRVTVRNWNGKVIVDIREFYVKEGKQLPG 17
G K+ A D + + +DIVV +ISKNRRV VR WNGKV+VDIREFY K+GK LPG
Sbjct: 13 GEPAAKRRAAGDDGPSESADDDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPG 72
Query: 16 KKGI 5
+KGI
Sbjct: 73 RKGI 76
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,939,573,105
Number of Sequences: 7387702
Number of Extensions: 301939573105
Number of Successful Extensions: 164633019
Number of sequences better than 0.0: 0
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