BLASTX 7.6.2
Query= RU11627 /QuerySize=236
(235 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|85718096|gb|ABC75065.1| TCP1 [Eschscholzia californica] 55 1e-006
gi|147798242|emb|CAN76016.1| hypothetical protein [Vitis vinifera] 54 2e-006
gi|157343505|emb|CAO68011.1| unnamed protein product [Vitis vini... 54 2e-006
gi|157338732|emb|CAO42083.1| unnamed protein product [Vitis vini... 53 5e-006
gi|85718100|gb|ABC75067.1| TCP2 [Hypecoum imberbe] 52 9e-006
>gi|85718096|gb|ABC75065.1| TCP1 [Eschscholzia californica]
Length = 123
Score = 55 bits (131), Expect = 1e-006
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Frame = -3
Query: 221 CEVVSGTD-----EVATDDIIDKVSRTSSSSSAKNRIKRIVRQPKKSALFNPLAKASREM 57
CEVVS D V TD D+ +++SS + KR+ R P + +F P AK SRE
Sbjct: 53 CEVVSEVDICNPSAVTTDQDHDQQVGNNNTSSVHKKEKRVTR-PSRKPMFLPQAKESREK 111
Query: 56 ARARARERTREK 21
ARARARERT+EK
Sbjct: 112 ARARARERTKEK 123
>gi|147798242|emb|CAN76016.1| hypothetical protein [Vitis vinifera]
Length = 200
Score = 54 bits (129), Expect = 2e-006
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = -3
Query: 233 SISECEVVSGTDEVATDD--IIDKVSRTSSSSSAKNRIKRIVRQPKKSALFNPLAKASRE 60
S S+CE +SG D + D I K R+ + +R RQ +K+A F PLA+ SRE
Sbjct: 14 STSDCEELSGIDTINGDQQGSISKGKRSKCLTK-----ERKTRQSRKNA-FQPLARESRE 67
Query: 59 MARARARERTREKM 18
ARARARERTREKM
Sbjct: 68 KARARARERTREKM 81
>gi|157343505|emb|CAO68011.1| unnamed protein product [Vitis vinifera]
Length = 549
Score = 54 bits (129), Expect = 2e-006
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = -3
Query: 233 SISECEVVSGTDEVATDD--IIDKVSRTSSSSSAKNRIKRIVRQPKKSALFNPLAKASRE 60
S S+CE +SG D + D I K R+ + +R RQ +K+A F PLA+ SRE
Sbjct: 343 STSDCEELSGIDTINGDQQGSISKGKRSKCLTK-----ERKTRQSRKNA-FQPLARESRE 396
Query: 59 MARARARERTREKM 18
ARARARERTREKM
Sbjct: 397 KARARARERTREKM 410
>gi|157338732|emb|CAO42083.1| unnamed protein product [Vitis vinifera]
Length = 357
Score = 53 bits (126), Expect = 5e-006
Identities = 32/72 (44%), Positives = 41/72 (56%)
Frame = -3
Query: 233 SISECEVVSGTDEVATDDIIDKVSRTSSSSSAKNRIKRIVRQPKKSALFNPLAKASREMA 54
SISE + S E+A + + SS ++ R+P+ + NPLAK SRE A
Sbjct: 133 SISESKGTSRLKEIAHNGEPKGIVTNGESSVLTTPKEKKNRKPRSKSALNPLAKESREKA 192
Query: 53 RARARERTREKM 18
RARARERTREKM
Sbjct: 193 RARARERTREKM 204
>gi|85718100|gb|ABC75067.1| TCP2 [Hypecoum imberbe]
Length = 133
Score = 52 bits (124), Expect = 9e-006
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = -3
Query: 233 SISECEVVSGTDEVATDDIIDKVSRTSSSSSAKNRIKRIVRQPKKSALFNPLAKASREMA 54
S+SECEVV D+ ++ + + ++ + KR +K++L PLAK SRE A
Sbjct: 63 SVSECEVVC-DDQFEITNVHEDLQMQAAGIKKVKKEKRKRGAARKASLNPPLAKESREKA 121
Query: 53 RARARERTREKM 18
RARARERT+EKM
Sbjct: 122 RARARERTKEKM 133
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,939,573,105
Number of Sequences: 7387702
Number of Extensions: 301939573105
Number of Successful Extensions: 164633019
Number of sequences better than 0.0: 0
|